Fulvia fulva: CLAFUR5_12995
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Entry
CLAFUR5_12995 CDS
T08195
Name
(RefSeq) Superkiller protein 3
KO
K12600
superkiller protein 3
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_12995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_12995
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CLAFUR5_12995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_16
TPR_14
TPR_8
TPR_22
TPR_12
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_7
ARM_TT21_5th
TPR_6
ARM_TT21_C
TPR_9
ANAPC3
TPR_10
TPR_5
TPR_Slam
TPR_4
Motif
Other DBs
NCBI-GeneID:
71992873
NCBI-ProteinID:
XP_047767750
UniProt:
A0A9Q8PIP4
LinkDB
All DBs
Position
11:1994743..1998900
Genome browser
AA seq
1385 aa
AA seq
DB search
MSTKAALKAAKTALDNQQYDKAAKQAQSVLSSDPDNHFAKLFLGRAFEKQGNFDDAAKTY
NSAAKAKPDDSQAWLGLCSVYEAQGAERLNEYREAAVKVAQIHAAADDRDRCQVVIDKLV
GSTKQHGNQFQQKKTLKVLLPGGPVYDFLEGRVQQPVITYMRLAEITETDEAQRISKEVG
ERRTRIGAKLGQVTVDVKREVFGSSDLERLYQEVINWSGDDEVRRQFEEKLLQRAFDVLI
VLTLEEKAAKLDQVLNLAEGMVIIHHPFQLAWDLVLETRDLDELRDLDAGILREYVALFP
TSGLGRILDGWLSSELSPFPAPPKGEDDEEPPKQLSAEDRLLLLTEGLSSAEQSPFAHRL
VSDYYLHLEEHESAAATARSGLRAVQVESGKLGMSFQNTKDALNSVLGTALVHYQAPRNH
AEARRLFEDIQQRKPKSTPALIGLGIILEETQDYQDAIAFFERALQEDKGNVRVGTELAW
CRALSGNYSQAIEELQNALEVIRPDDPRSKDLRAQTIYRLGVCLWETDTSKAARRDRNGA
YSQFLAAIRTNVNFAPPYTSLGIYYADYGKDKKRARQCFQKAFELSPAEVVAAERLAKSF
ADQGDWEIVEVIAQRVVDSGRARPPPGSKKKGISWPFSALGVVQMNKQEYQQAIVSFLAA
LRISPEDYQSYVGLGESYHNSGRYNSALRTFNYALEPHDGISMKVSGEIWFARYMLANVH
RELGEYDEAEAGLRHVLEERPTEFGVLVSLLQTYVEHAGKCLEGGLFGQAVENAKSAIAI
AMTIAKDTPNAFNLWKAVGDACSLFSWILSGTSDFPTEDIKALLDTSSDGNTYDILSDVD
RITLTGIDDDGGLPTSLIATVLAYKRAVHASSHDVHAQAVAWYNLGWAEQRAHACSDAKA
GKKYLTTAVRSFKRAIELEAGNYEFWNALGVVTTTLNPKIAQHAFVRSLHLNELNAKVWA
NLGVLYLLQNDTELAHSAFSRSQSTDPTYAHAWIGEGWIALLLGDTNEALNHFTHALEIS
DSTSVIAKRQYSVSSFDYLLTSPTASNDLTKLIQPIFALEQLRTQVPQDLPYQHLAALLL
ERVGDHIAAIEALTELVEAAEAEFEATESQAAEARYAMAKSDLARNQLAAGLFADAVENA
DTALDLTSGADNSGLNAEARRRLRLSAQLTSALAQYNLGQLNDSITMFKAALKESQTNPD
VVSSLVKVLWAYGEKQVASDSAFESFEKNPDHVGAVTLLGAIAALNDNHETAAAVRDDLL
LLRTKDTISGHDLDGIENLLSAMAAITTGSGDEGALEEARAAIMLKPDHPQAWSELAELS
GEVYAAEMALKTASQAVPPLGDMEVRELARAFAGVGTAGDAQRAIFLAPWESCGWNAMSE
VIGNR
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgaaagctgccttgaaagcggcaaaaacagccctcgacaatcagcaatatgac
aaggcagccaagcaagcacagtctgtgctatcatcagatcccgacaatcacttcgccaag
ctgttcctaggtcgtgctttcgagaagcaagggaattttgacgatgcggcaaagacttac
aactccgccgccaaggcaaaaccggacgactcgcaagcgtggcttggtctttgcagcgtg
tatgaagcacaaggcgccgagagactcaatgaatatcgagaagccgcggtgaaagtggcc
cagatacatgctgctgcggatgacagagatcgctgccaggttgtgatcgacaagctcgtg
gggtccacgaagcagcatggcaatcagtttcagcagaagaagacgctgaaggtcttgctt
cctggtggccctgtctatgatttcctcgagggtcgagttcagcaacctgtcattacgtac
atgcgtctggctgagatcaccgagaccgatgaagcgcagcgcatcagcaaggaagttggc
gagaggcggacgagaattggcgcaaagctggggcaggtcactgtagatgtgaagcgagaa
gtctttggaagcagtgatctggagcgactttaccaagaagttatcaattggtccggtgat
gacgaggtgcggaggcagttcgaggagaaactgcttcaacgagcatttgatgtgctcatc
gttctcactctggaagaaaaggctgctaagctggaccaggttttgaatctggccgaaggc
atggttattattcaccatccatttcagctggcttgggacttggtactggagacgagagac
cttgacgagctacgggacctggatgccggcatactgcgagaatacgtggcattgtttccg
acctctggcctcggcagaatcttggatggctggctgagcagtgagctttcaccattccca
gcgccgccaaaaggcgaggatgatgaggagcccccaaaacagctcagtgcagaggatcgg
ttgctactgcttactgagggtctttccagtgcagaacagtctccatttgcgcatcggcta
gtgagtgactactacctacacctggaagaacatgaaagcgctgcagcaactgcaagatca
ggtcttagggcagtgcaagtcgagtcaggcaagcttggaatgagcttccagaacactaaa
gatgcgttgaattccgtactgggcacagctctggttcattatcaagctcccaggaatcat
gcagaagctcggagactattcgaagacattcagcaacgcaaaccaaagtccacgccggcg
ttgatcggtctcggcatcattctggaagagacccaggactaccaggatgcgattgctttc
tttgagcgagctctgcaggaagacaagggcaacgtgcgcgtgggtacggagcttgcttgg
tgtagggcactgagcggtaactactcacaagctattgaagagcttcagaatgcgctcgag
gtgatcaggcctgatgatccacgctcaaaagacttgcgggcgcagactatataccggctg
ggagtgtgcctctgggagactgacacatcaaaggcggcacggcgggatcgaaatggcgct
tacagtcagtttctggctgccatacgaacgaacgtcaatttcgctcctccgtatacaagc
ttgggcatctactacgccgactacggaaaggacaagaagcgcgcacgacagtgctttcaa
aaagcattcgagctgtcccctgccgaggtcgtggcagctgagcgcctggcgaagtcattc
gctgaccaaggtgactgggaaattgtcgaagtcatcgctcagagggtggttgactcgggc
agggcacgaccgcctccgggttccaagaagaagggcattagctggccattctcggctctt
ggagttgttcagatgaacaagcaggagtaccagcaggcgattgtctcgttcctcgcagct
ttgcgcatctcacctgaagactatcaatcatatgttggccttggtgagagctaccacaat
tccggacgatacaattcagcacttcggactttcaattacgctcttgagccgcacgatggc
atttcgatgaaggtctccggtgagatatggtttgcgagatacatgcttgccaacgtacac
agggagcttggcgagtatgatgaagccgaagctggccttcgacatgtcttagaggagcga
ccgacagagtttggtgtgctggtgtcgcttctgcagacttacgtggaacatgctggcaag
tgtttggaaggtgggctcttcggtcaggccgttgaaaacgctaagagcgcgattgcgatt
gcgatgacaatcgcgaaagatacgcccaacgctttcaacttgtggaaagctgttggagat
gcatgctcactgttctcatggatcctgagtggcacatcggacttccccaccgaggacatc
aaagcgctgctggatacctcaagcgatgggaatacatacgatatcctcagcgatgttgat
cggattactttaacaggtatcgacgatgacggtggattgcccacatctttgatcgcaact
gtacttgcgtacaagagagccgtgcacgcatcgtctcacgatgtccatgcgcaagctgtc
gcatggtacaatctcggctgggcagaacaacgagcccatgcttgcagtgatgctaaggct
gggaagaagtatcttactactgcagtgagaagcttcaagcgtgcgattgagctagaagct
ggcaactacgaattctggaatgcgctaggcgtggtcactaccactctcaacccaaagatt
gctcagcatgctttcgtgcgctctttgcatctcaacgagctcaatgccaaggtctgggcc
aacttgggcgtgctctatctgctacaaaacgacactgagctcgcacactcagcattcagc
cggtctcaaagtacggatccgacctatgcgcatgcttggatcggcgagggctggatagca
ttgctcttgggcgacaccaacgaggcgctgaaccacttcactcatgccttggagatttcg
gattccacatccgtcattgcgaagcgacaatattccgtctccagcttcgactatcttttg
acttcgccgacggcgtcgaacgacctcacgaagctgatccaacctatcttcgccctcgaa
cagcttcgtacccaagtccctcaggatctgccgtaccaacatcttgctgcgctactactc
gaacgtgttggcgatcacatagccgccatcgaggcactgacagaactcgttgaggcagca
gaagctgagttcgaggccacagagtcacaggctgcggaagcgagatatgccatggcgaag
tctgatcttgctcgtaatcagctcgcagcaggcttattcgcagacgctgtcgagaacgcg
gacactgcacttgacctcacgtctggtgctgataacagcggcttaaatgcagaggcccga
cgcagacttcgactttcggcgcaactcacctccgcattggcccaatacaatctcggtcag
ctgaacgacagtatcaccatgttcaaggcggcgctcaaggagagccagacaaatccggat
gttgtcagctcgctcgtcaaagtgttgtgggcatacggcgagaagcaggtcgccagcgat
tctgcgttcgagagctttgagaagaatccagaccacgttggggcggtgaccctattaggt
gccattgctgccctcaatgacaatcacgaaacggctgctgctgtgcgcgacgacctatta
cttctccgtacgaaggacactatctctggtcatgaccttgatgggattgaaaaccttcta
tcggcaatggcagctattacaacaggaagtggagatgaaggtgccttggaagaagcccgg
gctgccatcatgctgaagccagaccatcctcaagcatggtcggaactggccgagctttct
ggcgaagtgtacgcagccgagatggcgctgaagactgcttcacaggctgtgccgccgctt
ggcgatatggaagttcgcgagttggcgagagcgtttgctggtgttggcactgcgggagat
gctcagcgagccatcttcctggcgccctgggaaagttgtggttggaatgctatgagtgaa
gtcattggcaacaggtga
DBGET
integrated database retrieval system
