Flavobacterium flavipigmentatum: LNP22_12575
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Entry
LNP22_12575 CDS
T10330
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ffv Flavobacterium flavipigmentatum
Pathway
ffv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ffv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LNP22_12575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ffv03400
]
LNP22_12575
Enzymes [BR:
ffv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LNP22_12575
DNA repair and recombination proteins [BR:
ffv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LNP22_12575
Prokaryotic type
LNP22_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFH37571
LinkDB
All DBs
Position
2891975..2892646
Genome browser
AA seq
223 aa
AA seq
DB search
MKINLSTEWQAVLADEIKKPYFKDLIEVLDEEYQKYICYPPAELIFSAFHSCSFADLKVV
IIGQDPYHGEGEANGLSFSVNDSVKIPPSLRNIFRELNDDLDSIFMPTSGNLAKWAKQGV
LLLNASLTVRKDSPNSHKYLKWNLFTDAVIQIISDQKENVVFLLWGSFAQKKGMKIDRSK
HFVLECGHPSPMSANQGKWFGNKHFSQTNAFLESKEIQKIEWL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaatctctccactgagtggcaagccgttttggcagatgaaattaaaaagcct
tattttaaggatttgatagaagttttagacgaagaataccaaaaatatatttgttatcct
ccggctgaattgattttctccgcctttcatagttgctcttttgcagatttaaaggtggtt
attattggtcaggatccttatcacggcgagggtgaagccaatggtttgagtttttctgta
aatgattcggtcaaaattcctccttccttacgcaatattttcagagaattaaacgacgat
ttagattcgatttttatgcctacttcaggaaatttagcaaaatgggccaagcaaggagtg
ttgcttttaaatgcttctttaaccgttcgaaaagacagtcccaatagtcataaataccta
aaatggaatctttttacagatgccgtcattcaaattatttctgaccaaaaagaaaatgtt
gtctttttactgtggggaagttttgctcagaaaaaaggaatgaaaatagatcgttccaaa
cactttgttttagaatgcggtcatccatcgcccatgagtgctaatcaaggaaaatggttc
ggtaacaaacattttagccaaacaaatgctttcttggaatcaaaggaaattcaaaagatc
gagtggttatag
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