Fulmarus glacialis (Northern fulmar): 104075506
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Entry
104075506 CDS
T08370
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
fga
Fulmarus glacialis (Northern fulmar)
Pathway
fga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104075506 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fga03019
]
104075506 (CNOT1)
Messenger RNA biogenesis [BR:
fga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104075506 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104075506 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104075506
NCBI-ProteinID:
XP_009574332
LinkDB
All DBs
Position
Unknown
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLXXXXXXXXXXTXCLAKVLESSVRSVVF
RPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNL
DEQLSAPKKDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAP
HITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDS
EESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAA
AQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAER
MPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIY
DKCMTELEQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDA
TSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLI
RNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLM
RINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKA
EYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ctacgaggttttgctgcccagtttatcaaacagaaactccccgatcttttgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgttgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcgaact
cattcggggttgacggatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgacgggaaggataaaagtgatggagcgcaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccgggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagtttttccagttaatgccatatacagaccttggaag
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgt
ccagatatgttggtattggccttattgcagatcaacacgtcctggcataccttgcgccat
gaactcatctccacactcatgccaatttttcttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcaatatgaccaggcaaaattgtcacgtatt
cttgatgtggcccaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagagaagatgtccatctatcctgggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccagaaaccttggcgactatgttggcatgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcagagacaatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccgcctggagtcatgccaaaaggacgcccgcccagtgct
agcagcttggatgccatctctcctgtacagatcgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacctg
ggctctgcattcagtactcctcagtcaccagcaaaagcgttcccccctctttccacccaa
aaccaaacaacaggtttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttactacgggtagcctgactggcataggaacgggagccctgggccttcctgcggtgaac
aacgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catccgaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaatttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatcctcagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaacattgatacgttgttagta
gcaacagatcaaacggagagaattgtggaacctccagagaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
acagtgaaagaagagttcatgccttgggtatcacagtatcttgtgatgaagagagtcagt
attgagccgaattttcacagcttatattcaaacttccttgacacacttaagaatcctgag
tttaataaaatggttctgaatgaaacttacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgcta
ctactggaagcatacgttaagggacagcaggaattgctnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnacgtagtgccttgccaaagtcttagaatccagtgtcaggagtgtggtcttc
aggcctccaaacccgtggacaatggccattatgaatgttttagctgagctacatcaagaa
catgatctaaaattgaatctgaagtttgagattgaggtgctctgcaagaatcttgcacta
gacatcaatgagctgaaacctggaagtctcctgaaagataaggatcgtctgaaaaatctg
gatgagcagctgtctgctccaaagaaggatgtgaagcagccagaagagctaccacccatc
acaacaactactgcttctacaactccagctaccagcaccacttgtacagccacggttcct
ccacagccccagtacagttatcacgacataaacgtctattctttaggaggtttggctcca
catattaccttaaatccaacgattccgctgtttcaagctcacccgcagttgaagcagtgt
gtgcggcaagcgatagagcgagcagtgcaagagcttgtccatccggtggtcgatcgatcc
attaagattgccatgactacttgtgagcagatagtcaggaaggactttgcactggattca
gaggagtcacgaatgcgtgtggccgcacaccatatgatgcggaacctgactgctgggatg
gccatgattacctgcagggaacctttgctgatgagcatagctaccaacttgaaaaatagt
tttgctactgcactgagggcagcctccccacaacagagggacatgatggagcaagcagct
gcccagttagcgcaggataactgtgagctagcatgctgctttatccagaagacggctgtg
gaaaaggcaggccctgaaatggacaagaggctcgcaactgaatttgagctcagaaaacat
gctagacaagagggtcgtcggtactgtgatcctgttgtgttaacttaccaggctgagcgg
atgccagaacagatcaggttaaaggttggaggtgtggacccaaaacagctggctgtttat
gaagagtttgcacgcaatgtccctggcttcttgcctaccaatgacttaactcagcctaca
ggattcttggctcagcctatgaagcaagcttgggctacagatgatgtagcacaaatctat
gacaaatgtatgacagaactggagcagcacctgcagtccattccacacaccctggccatg
aatcctcaagctcaagcattgcgcagcctcttggaggctgtggtagtggctcgtaactcc
cgtgatgctattgctgcacttggactgctgcagaaggctgtagagggcttactggatgcc
accagtggggcagatgctgacctcctgcttcgctatcgtgagtgtcatctgcttgtgctg
aaggctctgcaggacggccgtgcatatggatctccgtggtgtaataaacaaattactagg
tgcctgattgaatgcagagatgagtacaagtacaacgtggaagctgtggagctgctaatc
cgcaatcaccttgttaacatgcagcagtacgaccttcacttggctcagtctatggagaat
ggcctgaactacatggctgtggcatttgccatgcagctggtaaagatcctgttggtggat
gagagaagtgttgcccatgtaacagaggcggatctgtttcacacaattgagacactcatg
aggattaatgctcattccagaggaaacgccccggaaggattaccccagctgatggaagtg
gtccgatcaaactatgaagcaatgattgaccgtgctcacggaggtcccaatttcatgatg
cattcaggaatttcccaagcctctgagtacgatgatccacctggtctgagggagaaggca
gaatacctgctgagggagtgggtgaacctctaccattcagctgcagcgggccgtgacagt
accaaagcattctctgcgtttgttggacagatgcaccagcaaggaatcctgaaaacagat
gatctgatcacccgctttttccgtctttgcaccgaaatgtgtgttgaaatcagttatcgt
gctcaggctgagcaacagcataatcctgctgccaaccccactatgattcgagccaagtgc
taccacaatctggatgcctttgtgcgacttattgcactgctagtgaagcactctggggag
gcaaccaacacagtcacaaagatcaacctcctgaataaggttctcggtattgtggtggga
gttcttctgcaagaccatgatgttcggcagagtgagtttcagcaacttccttaccatcgc
attttcatcatgttgctgttggaattaaatgctcctgagcatgtgctggagaccatcaac
ttccagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcccagttactgatcgatcttttc
aagtacttggctcctttccttagaaatgtggaactcaccaaacctatgcaaattctttac
aagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctttgtgac
taccattatgggttctgtgatgtgatcccacctaactgtattcagctaaggaatctgatc
ctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaatttaaaggtg
gatatgctgagtgagattaatatcgctccacgaatactcacgaatttcactggagtgatg
ccacctcagttcaagaaagacttggattcctatctcaaaacccgttctccggtcactttt
ttgtctgacttgcggagcaacctacaagtatcaaatgaacctggcaaccgctacaacatc
cagctgattaatgcactggtgctctacgtaggtactcaagctattgcgcacattcacaac
aaaggcagcacaccctctatgagcaccattacccactcagctcacatggacatcttccag
aatttggcagtagacctggacactgaaggccggtaccttttcttgaacgcaattgccaat
cagctgcgatatcccaacagtcacacccactacttcagttgcaccatgctgtacctgttt
gcagaggccaacaccgaggctatccaggagcagatcactagggttctcttggaacgactg
attgtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaat
ccggcatttaagttctggaaccatgagtttgttcactgcgctccagaaattgagaagttg
ttccagtcagttgcacagtgctgcatggggcagaagcaggcccagcaagtaatggaaggg
actggtgccagttag
DBGET
integrated database retrieval system
