Fusarium graminearum: FGSG_06049
Help
Entry
FGSG_06049 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_06049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_06049
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
FGSG_06049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Nop53
Motif
Other DBs
NCBI-GeneID:
23553193
NCBI-ProteinID:
XP_011324669
UniProt:
I1RPS0
LinkDB
All DBs
Position
3:complement(4139708..4142305)
Genome browser
AA seq
807 aa
AA seq
DB search
MEKSQDFKSLQENVQKSLVSTIKTVNRIAAEDLSFQRTVNPNVGQQLDDRTSRILELSTR
LLQSTGKACGVKAPKLEDVEDIEMKWRGVVDVVDSSLEKADTALDEYTGLVKRKEPPASD
YNQAKKPKSTTKVIRNANISKPQLQFERKPDNFAPPPWKPILKAKPHASVSLKESLNIVL
NEAGTPQYQHPYEHEIVRMAYPKRVSREAEPIMYQPVDTTEATYVDTYEGVLEMLGELMK
AKEIAVDLEHHDFRSYVGLVSLMQISTREKDWIVDTLQPWRHKLEVLNQVFTNPKIVKVF
HGAYMDIIWLQRDLGLYVNGLFDTFFACGQLNYPAKSLAYLLSKFVDFDADKKYQLADWR
LRPLPQEMLYYARSDTHYLLYIYDRVRNELVAASDKTDADKDLIGRALEKSREQSLSRYE
HPDYDEETGEGSRGWSSYIFKNSHMAFDSEQFSVFRALWKWRDDTARKEDESTNFVLGNR
DISEIARINPPDAKALHSLLPLNASLARSRFNEIWGYIKESKAKGGRSLLHFFTSMAPDS
LMRNGVPIAARKTTRLPDLDGEVTVSRLTRSQLFGDMPISTQWDASTRRPKTEEDLIPFP
WQKFVEQGTIEGDVQHDTVTDPAVVPAQPNHVENAGGSAQVEEDDEEFTLKRGQKRKSEA
VEESDSSEEESESSDSASDEEMQDDNGVIAIEDESSGKAESKNARRKQRKAEEKKAKEEQ
LRRQEAKKARKAQKKQKKEDDKVKKFDAVPFDYSKATSVVNTKREPNTDVKGKKRVFDPY
SKSADTDIKGARKAPPVRGERSATFKK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcccaggatttcaagtcgctccaggaaaacgtccagaagtcgcttgtctcg
acaatcaagactgtgaaccggatcgcagccgaagacctgagctttcagcgcacagtcaac
cctaacgtcggccaacaacttgacgatcgaacttcacggattctcgaactatctacacgg
ctgctgcaatcaaccggaaaggcatgtggcgtcaaagcgcctaagctggaagatgtcgaa
gatattgagatgaaatggagaggtgtggtcgatgtcgtcgattcttcactcgaaaaggcc
gacacagcgttggatgagtacacaggacttgtcaagagaaaggagcctcctgcttctgat
tataaccaggccaagaaacctaaatcgacaaccaaagtcatccgaaacgccaacatctcc
aagcctcaacttcagtttgagcgaaagcccgacaacttcgctccaccaccttggaaacca
atcctcaaagcaaagccacacgccagcgtgtctttgaaagagagcctcaatatcgtgctc
aacgaagccggcacgccgcaatatcaacatccctacgagcacgagattgtccgcatggca
taccccaaacgtgtttccagagaagctgaacccattatgtatcagcctgtggacaccacg
gaagcaacttacgttgatacatatgaaggcgttctcgaaatgctgggggagctcatgaag
gcgaaggagattgcggtagacctggaacatcacgacttcagaagctatgttggacttgtg
tccctgatgcagatcagcacacgtgagaaagattggatcgtggatactctgcaaccctgg
cgccacaaactcgaggttctcaaccaagtttttactaacccaaagatcgtcaaggttttc
cacggtgcgtatatggacataatatggctacagcgagatttgggactttacgtaaacggg
ctctttgacacttttttcgcctgcgggcaacttaactacccagccaagagtcttgcttac
ctactgtccaagtttgtcgacttcgacgcggacaaaaaataccagttggcggattggaga
ttacgcccactgccccaggagatgttgtactatgctcggtccgatacccactacctactt
tacatttatgaccgtgtacgaaacgagcttgttgcagcctcggacaaaactgatgccgac
aaagacctcattggtcgtgctctagagaaatcaagggaacagtctctatctcgctacgaa
catcccgattacgacgaagagactggcgaaggctctcgcggttggagctcatacattttc
aagaactcccacatggctttcgatagcgagcaattttctgtctttagagctttgtggaaa
tggagagatgacacggccaggaaggaggacgagagcaccaactttgttctcggcaacagg
gacatctcggagattgctcgtattaacccaccagacgcaaaggcccttcacagcttactg
cctcttaatgcatcgctagccaggtcgcgcttcaacgaaatctggggatacatcaaggag
tccaaggccaagggtggccgaagtctgcttcacttttttacttcgatggcaccggatagc
cttatgaggaatggcgtacctatcgcagccaggaagaccaccaggttaccggaccttgat
ggagaggtcacagtcagcaggctgactcgctcgcagttatttggagacatgccgatcagt
actcagtgggatgcttcgactcgacggcccaaaactgaagaggatcttattccgttcccc
tggcagaagttcgttgaacagggtacgattgagggagacgttcaacacgataccgtcacc
gacccggctgtggtccctgcacaacccaatcatgtggagaatgcagggggcagtgctcaa
gttgaagaggacgatgaggaatttactctaaagaggggccagaagcggaagtcggaggcg
gtagaagaatctgactctagtgaggaagagtccgaatcatcagattctgcgagtgatgag
gagatgcaagatgacaatggagtcattgctatcgaggatgagtcgtctggtaaagcagaa
tctaaaaatgcccgtcgcaagcagcgcaaggcagaggaaaagaaagccaaggaagaacaa
ctccgacgacaagaggcaaagaaggctcgcaaagcccagaagaaacagaagaaggaggat
gacaaggtcaaaaagttcgatgcagtaccttttgattatagcaaggccacatcagtggtc
aatacgaagagggaaccaaacactgacgtcaaaggcaagaagagggtgtttgacccctat
tccaagtctgcagacacggacatcaagggagctcgcaaagcacctccagtgagaggtgag
cgaagcgcgactttcaagaagtaa
DBGET
integrated database retrieval system
