KEGG   Francisella halioticida: CDV26_07135
Entry
CDV26_07135       CDS       T04972                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
fha  Francisella halioticida
Pathway
fha02024  Quorum sensing
fha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CDV26_07135
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CDV26_07135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fha03019]
    CDV26_07135
   03036 Chromosome and associated proteins [BR:fha03036]
    CDV26_07135
Messenger RNA biogenesis [BR:fha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CDV26_07135
Chromosome and associated proteins [BR:fha03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CDV26_07135
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Carmo_coat_C
Other DBs
NCBI-ProteinID: ASG68194
UniProt: A0ABM6LZY4
LinkDB
Position
complement(1333319..1333648)
AA seq 109 aa
MSRISSLQDPFLNALRKEKVSVSVYLVNGIKLQGQVEAFDQFCIVLRNTVNQMVYKHAIS
TIVPAKSVRMVYSSFNPYHQNSNEDKDESVADVHYDDLEAQENEGNINE
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtcaagaatatcatctttacaagacccgttcttaaatgctttaagaaaagaaaaagtt
agcgtatcagtatatcttgtaaatggaattaaattacaaggtcaagtagaagccttcgat
cagttttgtatcgtacttagaaatactgtaaatcagatggtttataagcacgccatttca
actatagtaccagctaaaagtgtaagaatggtttatagttcttttaatccatatcatcaa
aattcaaatgaagataaagatgagagtgttgctgatgttcattatgatgatctagaagct
caagaaaacgaaggtaatattaacgagtaa

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