Fervidobacterium islandicum: NA23_08150
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Entry
NA23_08150 CDS
T04215
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fia
Fervidobacterium islandicum
Pathway
fia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NA23_08150 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fia03019
]
NA23_08150 (rny)
Messenger RNA biogenesis [BR:
fia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NA23_08150 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
LRIM1_dimer
KH_NusA_2nd
Spore_YhcN_YlaJ
KH_KhpA-B
Tweety
Motif
Other DBs
NCBI-ProteinID:
AMW33211
UniProt:
A0AAI8GDF4
LinkDB
All DBs
Position
complement(1716797..1718344)
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AA seq
515 aa
AA seq
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MLIYIVLAIAGIALGFYLGSTVGRKKAQEEIEKKLKAAKEDAESIIKNAEKEAAEIKKRM
IIEAREEAHQIREEIEKERKRREEEIKQLEERILKREELLNKREEMLDKRESFVENLKIE
LEAKAKEIEAKEKEIQDKFTKLAGLTHEQAREIVLQEAREKYEHEIAKVFVQIKARYEED
AEKYAKKVIADAIQRYAPEYTGEVTISTVALPNDDMKGRLIGREGRNIRTFEKITGVDLI
IDDTPEMVTLSSFNPLRREIARRTIERLVQDGRIHPARIEEMYEKAKAEVEKEIKEAGQE
AVITVGVGGLHPEVIKLLGRLKFRTSYGQNVLNHSIEVAQIAGLLAAELGLNVDKAKRGG
LLHDIGKALDHEVEGSHTVIGAEILKRYGESDEIINMIMAHHGEEEPITPEAAIVTAADA
ISAARPGARREDVESYIKRLMKLEEIAKSYKYVENAYAIQAGREIRVIVQPEKTDDATIE
KLAHDIAMRIENELQYPGVLKVVVIREKRSISYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
attttgatatacatagtcttagcgatagcaggtatagcattgggattctaccttggtagc
acggttggtagaaaaaaggcacaggaagagattgaaaagaagctcaaagctgccaaagaa
gatgccgaaagtataataaagaacgctgaaaaagaagcagctgagataaagaaaagaatg
attatcgaagcgcgtgaagaagcgcatcagattcgcgaagagatagaaaaagaaagaaaa
agaagagaagaagaaataaagcaactcgaggaaaggattttaaagcgtgaggaattatta
aataagcgtgaagagatgctcgataagcgtgaaagtttcgttgaaaacttaaagatagag
ctggaagcaaaagcgaaagaaattgaagcaaaagaaaaggaaattcaagataagtttacc
aaactcgcagggcttacacacgagcaagccagagagatcgtgctccaagaagccagggaa
aaatacgaacatgaaattgcaaaggtttttgtccaaattaaggcaaggtacgaagaagat
gctgaaaagtacgcaaaaaaggttatagcggatgctatacaaaggtacgctcctgaatac
accggtgaggtcactatcagcaccgttgctttacctaacgacgatatgaaaggtcggtta
ataggaagagaaggtaggaatatcagaacatttgaaaagataacaggtgtagatctcatc
attgacgatactcctgaaatggtgactttaagttcgtttaacccattgagaagagaaatc
gcaagaaggactatagaaagattggtgcaagatggaagaattcaccctgctagaatagaa
gaaatgtacgagaaggcgaaagcagaagttgaaaaagaaattaaagaagcgggtcaagaa
gcggtgattacggttggtgtcggaggactgcatccagaagtcatcaagttactcggtagg
ttaaaattcaggacaagttacggacagaatgtcttaaatcactcaattgaggttgctcaa
attgcaggtttgcttgccgctgagcttggtttgaatgtggataaggccaaacgtggagga
ctgttgcatgacataggtaaggctcttgatcatgaagttgaaggctcacatacagtaatt
ggtgcggaaattttaaagagatacggtgaatccgatgaaattatcaacatgataatggca
caccacggagaagaagagccaattacaccagaggcggcgatagttaccgcagcggatgct
atctctgctgcaagacctggtgcaagaagagaagatgtggaaagctacattaaaaggttg
atgaaactcgaagagatagcaaagagctacaagtacgttgaaaatgcatacgcgatccaa
gctggtagggagatcagagttatcgtccagccggaaaaaacagacgatgcaacgattgaa
aaattggcgcacgacattgcaatgaggattgaaaacgaactgcagtatccaggtgtactg
aaggtggttgtgataagagaaaagcgctctatctcttacgctaagtaa
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