Fructilactobacillus ixorae: M8332_02590
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Entry
M8332_02590 CDS
T08281
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fix
Fructilactobacillus ixorae
Pathway
fix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M8332_02590 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fix03019
]
M8332_02590 (rny)
Messenger RNA biogenesis [BR:
fix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M8332_02590 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_KhpA-B
TUDOR
KH_2
Motif
Other DBs
NCBI-ProteinID:
USS93756
UniProt:
A0ABY5C4P6
LinkDB
All DBs
Position
548611..550170
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AA seq
519 aa
AA seq
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MVIAIVGCAAIAMIVGFLIGQFTHKRTVEAKLDAAHQNANDILTDAQRQAEKQLQAATAK
AKQDGNAYRAKVEKNLKKRRADIQRQEDYLLKREEALDRKDQAFEKRDDNLNRLEKKISN
EKKALEKKQQDAEALIAKRQAEVTRVAALTEAEARDLVIDETKRSLADVRAQMIKQNYES
AKETAAWDAKNLIVEALQQSSADIVSETTVSVVTLPNDDMKGRIIGREGRNIRTFETVTG
IDLIIDDTPNAVVLSGFNPIRREVAKLALEKLIKDGRIHPARIEEMVEKSKKELDQQIQE
EGETVIFDLGIHAMNPELVKLVGQLKYKISYGQNVLSRSIQVAKLAGVFAAELGEDVTLA
KRAGLLHEIGRASASGSDESYVEAGVDIAKKYGEDPVVIDAIRLGNQENEPHSLISELVD
VADRISMARPGAKSESLESFVHRLEKLETITNRFPEVEKSYAVQAGREIRVIAKPEKISD
SQAIVLVREIKDQIENEMNHPGHVKVKVIREVRSVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtaattgctattgttggatgcgccgctatcgctatgattgttggttttttaattggg
caatttactcacaaacgaacggttgaagcaaagttagatgccgctcaccagaatgctaat
gatattttaacggatgcacaaagacaggctgaaaaacagttgcaagcggcaactgcaaag
gctaaacaggatgggaatgcttaccgagcaaaggtcgaaaagaacctcaaaaaacggcgg
gcggacattcaacgtcaagaagattatcttttgaagcgggaagaagcgttggatcgcaag
gatcaggcgtttgaaaaacgggatgataatcttaatcggttagaaaaaaaaattagtaac
gagaaaaaagcacttgagaaaaagcaacaagatgcagaagcacttatcgcaaaacggcag
gccgaagtaacacgagtggctgctttaacggaagcagaagcacgtgatttggtgattgat
gaaacgaaacgctccctagcagacgtccgggcgcagatgattaagcaaaactatgaatct
gccaaggaaacggcggcgtgggacgcgaagaacctgattgttgaagcgttgcaacagagt
tcagcggatatcgtttcagaaacaaccgtttccgttgttaccctcccgaatgatgatatg
aagggaagaatcatcggtcgcgagggtcgcaacattcggacttttgaaaccgtaacgggg
atcgatctcatcatcgacgacaccccgaacgcggtggttttgagtggatttaatccaatc
agaagagaagttgccaagttagcccttgaaaaattgatcaaggatggtcggattcatccc
gctcggattgaagaaatggttgaaaaaagtaaaaaagaactcgaccaacagattcaagaa
gaaggggaaaccgtcatctttgacctagggattcatgcgatgaatcctgagttagtcaaa
ctcgtgggccagttgaaatataaaatttcatatggtcaaaacgtcttgtcccgctcaatt
caagtggcgaagttagctggagtttttgcagctgagttaggtgaagatgtaacattagca
aagcgcgcaggattattgcacgagattggaagagcctcggccagtggcagtgacgaatcg
tacgttgaggcgggcgttgatattgccaagaagtacggtgaagatccagtggtgattgat
gcgattcgcttaggaaatcaggaaaatgaaccccacagcctgatttctgaactagttgat
gtggctgatcggatttcgatggctcgtcccggagcgaagagtgagtcactggaaagtttt
gtccaccgcttagaaaagcttgagacgattaccaatcgcttccctgaagtcgaaaagagc
tacgccgtccaggccggacgcgaaattcgggtgattgcgaaaccagaaaaaatttcggat
tcccaagcaattgtcctggttcgagagattaaggatcaaattgaaaacgagatgaaccat
cctggtcacgtgaaggtcaaagtaatccgagaggttcgttccgtcgaatatgcaaaataa
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