Fructilactobacillus ixorae: M8332_03765
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Entry
M8332_03765 CDS
T08281
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fix
Fructilactobacillus ixorae
Pathway
fix03030
DNA replication
fix03430
Mismatch repair
fix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M8332_03765 (dnaE)
03430 Mismatch repair
M8332_03765 (dnaE)
03440 Homologous recombination
M8332_03765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fix03032
]
M8332_03765 (dnaE)
03400 DNA repair and recombination proteins [BR:
fix03400
]
M8332_03765 (dnaE)
Enzymes [BR:
fix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M8332_03765 (dnaE)
DNA replication proteins [BR:
fix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M8332_03765 (dnaE)
DNA repair and recombination proteins [BR:
fix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M8332_03765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
USS92761
LinkDB
All DBs
Position
complement(769458..772790)
Genome browser
AA seq
1110 aa
AA seq
DB search
MAYAPLQNISSYSLLQSTTKLPDLVSAAKKQGYNAVALTDQNVMYGAVAFEKEARQQGLK
PIIGLKLTVQGTVLTEHQFELVLLAKNQTGYQNLMQLSSLAMTKSDALTLDQMADWLTDL
FVLLPESSEALSLLDYDRPADAIQVVQTLTALADPEAVKLGLPMDATAAVITARQAVADA
TQTELVALNAVDYLQATDYFDVRVLRSIDTGTPLGSIPEQQALLGKHWLRPAQEVEQAYQ
QQSLQAALTVNQKIVAACDVHIPKQTPHLPRFETPNQESAIAYLQELCTKGLADRLHQAP
PAAYTERLQHELDVIDRMGFSDYFLIVWDVINFAHQQHIITGPGRGSAAGSLVAYVLRIT
DVDPIKYDLLFERFLNEERAQMPDIDMDIPDDQRDEILQYVHDRYGDTHVAQIITFGTLG
AKQAIRDVGRVFGMRPEQMNQWSAAIPNHLHQTLSNALQESQKLQNLIADQPLNATLFKT
AQQLEGLPRHYSTHAAGVILSDQPIVEKAPVQAGNEGLLMTQYSKYYVEDVGLLKIDFLG
LRNLSIMANILQIVHNQLDADFDVTKIDLNDSQTMELFQAGRTNGVFQFESSGIKQVLRR
MHPDRFELIAAVNALYRPGPMENIDTFIKRKNGQEEYHYQNAAIQKILGATYGIIVYQEQ
VMQLAATMAGFSLGQADVLRRAMSKKHHQEMESMRERFISGSLHNGYSQETAEQTFAYIE
QFASYGFNKSHAVAYSKMAVELAYLKAHFPGPFFTALLNSVLGNQVKIRNYIQEAKDDGI
SVLPPDINRSELDFTYQDQGIRFGLRAVKGLRSDLMQALITTRREEGDFRDLNDVIQRLP
QKFRKVEPLQTLAAVGAFDQFGYNRRELSEAIPKFISAADLSGSLLASIPGMEVEIQRKA
DWPAWQKINYESEYLGTFLSGHPVERYDQLKQRQNALRSNQLSAGQQHVNLVLLVNHIKS
IRTKKGQLMAFVTASDQFGEVDLTLFPNVYQAAQEWLQPNQVVLVTGNVEERRGLQVVVD
QLQPAANVVHQQTTGSKRLFLQILPTQEQPTQLQHLQALLQAHPGSVPVILYWASSKQRQ
LLPKAWQVNPSSDVMDQLQALLGTKNVVLK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgcaccattacaaaatattagttcctacagcttattgcaaagtacaactaag
ctaccagacctagtttccgctgcaaagaagcagggttataacgctgtggcgttaaccgat
caaaacgtgatgtacggagctgtcgcgtttgaaaaggaagcccggcagcaggggttaaaa
ccaatcatcgggttaaagctaacggttcagggaacggttttgacggagcaccagttcgaa
ctggtgctattggccaaaaatcaaaccggttatcaaaatttaatgcagttgtcgtcactt
gcgatgacaaaatcagacgcgctcacactggaccaaatggccgactggttaacggatctg
tttgtgttactgccagagagtagcgaagcactatcattgctagactatgaccggcccgcc
gatgccattcaagtcgtccagaccttaaccgcccttgccgatccggaggccgtcaaactc
ggcctcccaatggatgccactgctgctgtgattactgcccggcaagccgtggcagatgcc
acgcagaccgagttagtggccttaaatgccgttgattacttacaagctaccgattacttt
gacgtgcgggtactacgttccattgatacggggactccactcggttcaattccagaacaa
caggccctgttaggcaagcactggctccgaccagctcaggaagtggaacaagcctaccaa
cagcaatcccttcaggcggcgttgacagttaaccaaaaaattgtggccgcctgtgacgtg
cacatccccaagcaaacaccgcatcttccgcggtttgaaacgcctaatcaggagtcagca
attgcgtacctccaggagttgtgtacgaagggcttagccgaccgactgcaccaggctccc
cccgcggcctataccgagcggttgcaacatgaactggacgtcattgaccggatgggtttt
agcgactactttttgattgtgtgggatgtcattaattttgcccaccagcagcacattatt
acgggaccgggtcggggctctgccgcggggtcgttagtggcctatgttttacggattacc
gatgtcgacccaattaagtacgacctgctgtttgaacgatttttgaacgaagaacgggcc
caaatgccagatattgacatggatattccggatgaccaacgtgatgaaattctgcagtac
gtgcatgatcgttacggtgacacccacgtagcccaaattattacctttgggaccctcggg
gccaagcaagcaattcgcgatgtgggccgggtgtttggaatgcgccccgaacaaatgaac
cagtggagcgccgcgattcccaatcatttgcaccaaaccctaagcaacgctttacaggag
tcccaaaaattacaaaacctaattgcagatcaaccgctgaacgcgaccctgtttaaaacg
gcccaacagttagagggcttaccccgtcactactcgacccacgcagccggggtcatctta
agtgaccaaccaatcgtggaaaaggcgccggttcaggccggaaacgaagggttactaatg
acccaatactcaaagtactacgttgaagatgtgggcttgttaaaaattgatttcttgggg
ttacggaacctctccatcatggcgaacattttacaaatcgtgcacaaccaactggatgcc
gattttgacgtgactaaaattgaccttaatgattcgcagactatggagctatttcaagcc
ggtcgaaccaacggcgtgttccagtttgaatccagcgggattaaacaagtactgcgccga
atgcacccggaccgctttgaactaattgcggcggttaacgccttgtatcgtccgggtccc
atggaaaacattgataccttcattaaacggaaaaatgggcaagaagaatatcattaccaa
aatgcggccattcaaaagattttgggcgcaacctatggcatcattgtttatcaagaacaa
gtaatgcagttggccgccacgatggccggcttttcactgggacaagctgacgtgttacga
cgagccatgagtaagaagcaccatcaagaaatggagtcgatgcgggaacgctttatttca
ggatccttgcacaatggctattcacaggaaacggcggagcagacgtttgcttacattgaa
cagtttgcaagttatggttttaataaatcccacgcggttgcctacagtaaaatggcggtt
gagctggcctatttgaaggctcactttcctgggccctttttcaccgctctcttgaattca
gtcctaggtaatcaggttaagatcagaaactacattcaagaagccaaggacgatggcatt
tccgtgttaccgccagacattaaccgaagcgagcttgattttacgtatcaagatcaagga
attcggtttggtttgcgagcggtgaaggggttacgttctgatttgatgcaagccctcatt
acgacgcgcagagaggaaggcgactttcgtgatctaaacgatgtgatccaacggctgcct
cagaaatttcgcaaggtggaacccttacaaaccctcgctgcagtgggggcatttgatcag
tttggttataatcggcgggaattgagcgaagcgattccaaagtttatcagtgctgctgat
ttatcgggctccctgttagcttcaattccaggcatggaggttgagattcaacgcaaagcg
gattggcctgcttggcagaaaattaactacgaaagtgagtacttagggacctttttgtct
gggcatccggtggaacggtatgaccaactaaaacagaggcagaacgccttacgtagcaac
caattaagtgcgggacaacaacacgttaacctcgtgctattagtgaatcacatcaagagc
attcggactaaaaaaggccaactaatggcctttgtgacggcctctgatcaatttggggag
gtggatttaaccctctttccgaacgtttatcaagcggcacaggagtggctgcaaccaaac
caagtagtcctggttacgggtaatgtcgaagaacgtcggggcttacaggtggtggtggac
caactccaaccagctgcaaacgttgtgcaccagcaaactaccggttcaaaacggctcttt
ttacaaattctcccgacccaagagcaacccacgcaattgcaacacttacaggcactgttg
caggcacatcccggatcggtccccgtgattttatactgggcgagttctaagcaacggcaa
ctgttgccaaaggcatggcaagtcaatcccagttcggacgttatggaccaactacaggcg
ttgttagggacgaagaacgtggtcttaaaatga
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integrated database retrieval system
