Fructilactobacillus ixorae: M8332_06050
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Entry
M8332_06050 CDS
T08281
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fix
Fructilactobacillus ixorae
Pathway
fix03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M8332_06050 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fix03019
]
M8332_06050 (rny)
Messenger RNA biogenesis [BR:
fix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M8332_06050 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
MG280
DUF7956
DUF1016_N
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
USS93154
UniProt:
A0ABY5C2Z4
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All DBs
Position
complement(1203782..1205413)
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AA seq
543 aa
AA seq
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MINVVKNTMKGGTAMLYLIGGIGALVVGLIAGYVQQNRQVNHRLSHAHTQAQTIATDNQQ
QVAAAVQQIRQKIEAEVADHQADVEQEIDEQIAENELRQDRIDFQAKSLQSFANRLDKTK
QNLDRSQAELQDLQNTIATDQARADQLQQERERVVHEKSGLAPEQAEQVVLQTTRTTLQQ
DYEMTVRDEHEEHQFTAPKTARQLMVDAIQAGPVDVPRAHIDRNVIIPDEGMRNKIVGKN
EQRLRLLETLIGVDLIFNPESPETLIISTNDPLRREIARGVVNELITAKQVNPGVIEQLV
RSTERQVLERLRTTGEETCASLHLGWVHPDLMKLVGRLQYRTSYGQNVLQHSVEVAELCG
MMATELGANVRLAKRAGLLHDIGKAVDREVNGTHVELGVQIAQTYGEDEAVVDAIAASHG
DVDSEATIAVLVRVADSMSGARPGARSESVEEYLNRLKGLERIANSHPAVKDSYAIQAGR
ELRMMVDPATINDQQTNQLAEQVCEQIESELTYPGKIKVTAIRRSNAVQYVGGKPQARKK
HAS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgtagttaaaaacaccatgaaagggggaactgcgatgctatatttgattggg
ggaatcggagcgctggtggtcggcttaattgctggctatgtccagcaaaaccgacaggtt
aatcatcgccttagccacgcgcacacccaagcgcaaacgatagcgactgataatcaacaa
caggtggccgctgccgtgcagcagattcggcaaaaaattgaagccgaagtggcggaccac
caggccgatgtggaacaagaaattgacgaacaaatcgctgaaaacgagttgcgtcaggat
cgcattgattttcaggcgaagagtctccaaagttttgccaatcggttggataaaactaag
caaaatctcgaccgctcccaggccgaattgcaggacttacaaaacaccatcgccactgat
caagcccgcgccgatcagttacagcaggaacgggaacgcgtggttcacgaaaagagtggc
ctggcgcccgaacaagcggaacaggtcgtgttgcaaacgacgagaaccaccctgcaacag
gattacgaaatgacagttcgcgatgaacacgaagaacaccagtttacggccccaaagaca
gcccggcagttgatggtggatgccatccaagcggggcctgtggacgtaccccgggcgcac
atcgaccgcaacgtgattattccggacgaggggatgcgcaataaaattgttggtaagaat
gaacaacggttgcggttgttagaaacgctcatcggggttgatttgatttttaatcccgag
agtcctgaaacgctaattattagtactaacgaccccctccgccgggaaattgcccgggga
gtggtgaacgaactaattactgccaagcaggtcaatcccggagtgattgaacagctggtg
cggagtaccgaacggcaggtgctcgagcgactgcgaacaacgggggaagaaacctgtgct
agtttgcaccttggctgggttcatcctgatctcatgaaactggttggtcgcttacagtac
cggaccagttacgggcaaaacgtactccaacactccgtggaagtggccgagttgtgtggc
atgatggccacggaactaggtgcgaacgtccgcttagccaaacgggcgggcttactgcat
gacatcgggaaagcagtggaccgggaagtaaatgggacccacgtggaactaggggtgcag
atcgcccaaacctatggggaagacgaagcagttgtggatgcaattgcagcttcccatggc
gacgtcgattcggaagcgacgattgccgtgctcgtgcgggtggccgattcaatgtctgga
gctcgaccgggagcgcggagtgaatccgtggaagaatatttaaaccggttgaagggactt
gaacgaattgccaattcgcatccggccgttaaggatagctatgcaattcaggccggccgc
gagttgcggatgatggtggatcccgcgacgattaacgatcagcaaaccaatcaactggca
gagcaagtctgtgaacagattgaatccgagttaacctatccggggaagatcaaggttaca
gctattcgtcgttcaaatgccgttcaatatgtcgggggtaaaccccaagcacgcaaaaag
cacgcaagttaa
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