Fusarium keratoplasticum: NCS57_00386100
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Entry
NCS57_00386100 CDS
T09757
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
fkr
Fusarium keratoplasticum
Pathway
fkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS57_00386100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fkr03019
]
NCS57_00386100
Messenger RNA biogenesis [BR:
fkr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCS57_00386100
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCS57_00386100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
77682127
NCBI-ProteinID:
XP_052916000
LinkDB
All DBs
Position
3:1505747..1512528
Genome browser
AA seq
2185 aa
AA seq
DB search
MVPPPRAGSFSPNPAQTLQTGSSHSPHPSQAAILSAGASPSASSPTGTNSLTKIVVAQVY
LLLSTIKEDKDRAKWELQVDQLKKLIDEHGMEVFSKYFTRLVAGNAPQIFPGLNRPVSNP
GNYHILVGEMRKIAHDPEQASKIAESIESGTEDIFRDFDLSTFMEHFKLDALEKTLLALA
FKLGSRTDLKTKADAILSTNFPTFVDIISRPELEAHADLTPSFIALIIDRFLQYHPPSFN
SSSRRDLESYLAKRYISVDQPPPSEVLAALDLSRVLADRPSNGLVRYLQKTGIEFTRDEE
TCVSYLQNRASNLQLNAEQVSAALTFTTITQTPQHDPDVLVAALRRVLPKSFDWMEVIGY
FDQPSARVSSQQFLRLYNAFLPIAQDPNSDLDIQRLWGGVWRHPEAQLSFVSAYASLTPE
QLDATTIPGLRRSITLDDYANSPPNVRERAAVAVKHPLVSVAALSSIFNVALSSVVASTS
VEAKRLFQEVVVPNLDIFLVSAFEVPRQHWAAMAIDTLNSLFENFLYKRSPEYDFVLDSL
WKKDKEWVTQRLIDAHAIKPVDLPLVFEHAVKHNWLDSLVYLANGFGIDLAALAHAEGYL
DLSKWARFYADRGNEMSRTLLQFLMIKANLESQYQRGGPDGQPLAKTTTTLQVRTVSALL
HILEDLLPKGPVQELIIIQRHCIIAYPRLINYGEGYDDIIDANGKDGNALPPTANSKMEE
HYKKMYSDEMQVRNIVEVLDRYKHSKDALDQDVFACMIHGLFDEYSHYVDYPLEALATTA
VLFGGIISHKLISGLPLQIGLGMILEAVRDHVPDDPMYKFGLQALMQLLVRFREWPLFCR
QLVLIPGLMGTEAHKKAEEVVMEHEEDLSRGPNGAGTPHGVGYPGDTFPNGNSEEQANAD
RQAPAFSSISVDPPAPEMDFEDPNEVEQDKVQFVLNNITEGTLVSMSSELRETLERRHQQ
WFACQLVEERAKMQPNYHHVYLELVRLLEDTSLWGEVLRETYVSVSRMLNSEATMQNSTE
RTHLKNLGGWLGLMTLARDRPIKHRNIAFKQLLIEAHDTKRLIVVIPFVCKVLVQGATSA
VFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRPVIE
EPADVLPQEQIDAFENLSLNGMGSAVGAGLSPQAIAPTIPDLGPLINIPPTNEMVVTSTR
LHDIVRTALSRALQDIIQPVVDRSVTIAAISTQQMIHKDFATEPDENRVRTSAINMVKAT
AGSLALVTSKEPLRANFTNYMRNLSNDIPQGLPEGTIIMCVNSNLDLACNIIEKQAEERA
VPEIEEMMEGELEARRRHRMQRPNEPYFDSSLSRWAMTIPHPYKLSPTSNGLNSDQMAIY
EDFARQPRSAAAPAPSHGPSTSDATRSLANEVLQEQFTAMPNIPTPAETPAIQQHLSTQM
QPYAPVHAGANAMSNGRSPGFTMDVRGLAERVNKLLQELLRVATEAREDHFQGLPRPHPV
LDVVDALVQHIIKTSQNSEEFAIYAAEQISQIIFSPVEDNLTLESLVHVLETLRKISGPA
LNNRVRALFSQQPGPTFLSLPLLAALTRTDLLDWRNIDLAMSKALQARKEGSLDFLEHML
DLTLLNNRPIALYADFVRTLEAAWAWIREDPGSAIGQRVRSKLIGSGLSHPSQADDQALY
RQDQMDYVLDEWVHLCNNHNASDASGSIFVQQLQAKQVIRDRDDFFVFLRTAIDTSVERF
EHTMHPGALTDVYITVDALAKLIGTFVSLQFDTSSTRASFVDSTMALITLVLNHHSVKRG
EQLNQRVFFRLLSMLLHEIHAISEDFSEEERRDILLRIASRLAGMGPALIPGFTYGWLSL
VQHRAFMPVLLQLPDGAGWGLFVDLVCQLFESLGDQLKVFEVSNIAKDIYRAAFKLLIIL
QHDFPDFVAANHVRICASIPPHCTQLINAVLAANPQQSPKFVEMNAKDRSDESRVHPGLV
NEATAILRDAGLLGVVDQALQSGPSEDIVANITHSMTHNAPKVTTYGHVPVAVNLAVINA
VVIYIGQHAADQAAQAGTAVTVSGDEHEVSTLSLIIHELPAEARYYLLVSVVNQLRFPNA
HTDFFSQALLYIFSKDLEDPEETEIRQGITRVLLERLVSFWPQPWGLLFTVVEIVKCDKY
NFFELPFIKAIPEVAEKFGQVVQRG
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggtcccaccacctcgagcgggatcattttcgcccaatcctgcgcagactcttcagacg
ggttcgagccattctccccacccatcgcaggccgccatcctcagtgctggcgcaagccca
agcgccagcagtccgacgggcaccaactccctgaccaagattgtcgtggcccaggtctat
cttctgcttagcaccatcaaggaggataaggaccgcgccaagtgggaattgcaggttgac
caattgaagaagctcatcgatgaacacggtatggaagtcttctcaaagtacttcacccgg
cttgtcgccggcaatgcgccgcagatattccccggcctcaacaggccagtctcgaatcca
ggcaactatcacatcctcgtcggcgagatgcggaagattgcgcacgatccagagcaagcg
agcaagatcgccgagtcaattgagagcggtactgaagacatcttccgcgactttgacctc
tcgacctttatggagcatttcaagctcgacgccttggaaaagaccctgttagctctggcc
ttcaagcttggctcccggaccgacttgaaaaccaaagccgacgctatactctcgacaaac
ttcccaacctttgtcgatatcatctctcgacccgaactcgaagcccatgctgaccttacc
ccctccttcatcgccctaatcatcgaccgattccttcagtatcaccctcccagctttaat
tcgtcttctcgtcgagatctcgagagctacctcgcaaagcgatatattagcgtggatcaa
ccgccgccttccgaggttctagctgctcttgacctgagcagagtgctcgccgatcgacct
tccaatggcttggttcggtacctccaaaaaaccggcatcgaattcacgcgagacgaggaa
acttgtgtttcgtatctacagaaccgtgccagcaacctacagcttaatgccgaacaagtc
tccgccgccctgacgttcacaactatcacccaaaccccgcaacatgaccccgacgtcttg
gtggcggccctcaggagggtactgccgaaatcctttgactggatggaggtgattggttat
ttcgatcagccgtccgctagggtctcttctcagcagttcttgcgtctctacaacgccttt
ttgccaatagctcaagacccaaactctgatctggacatccagcggctttggggtggcgtg
tggaggcatccagaggcgcagctatcctttgtcagtgcatacgcctctctaacccccgaa
cagcttgacgcgacgacgatccctgggcttcggcgcagtattaccctagacgactatgca
aactcccctcccaatgttcgcgagcgagctgctgtggctgtcaagcatccgctcgtttct
gtggctgctctctcctcaatcttcaacgtcgcactgagttccgttgtggcctccacgagc
gtcgaagcgaagaggctgtttcaagaagtggttgttccgaatctcgacatctttctcgtt
tccgctttcgaggtccctcgccagcattgggcagcaatggccattgatacgctgaactcc
ttgttcgagaacttcctctacaagcgctcacctgagtacgacttcgttctcgatagcctg
tggaagaaggacaaggagtgggtaacgcagcgtttgattgacgcgcacgctatcaagcct
gttgatcttccccttgtttttgagcatgcggtcaagcacaactggttggattcgcttgtg
tacctagccaacgggttcggtatcgacttggctgcgctggctcacgctgagggatatctg
gacctgtctaagtgggcacgattctacgcagaccggggaaacgagatgtctcgcactctc
ctgcaattcctaatgatcaaggccaacctagaaagccaataccaacgaggcggtcctgat
gggcaaccgcttgcaaagactacgacaactctgcaggttcgaaccgtatcagcactatta
cacatcctcgaagatctcttgcccaagggtcctgtccaggagctcatcataattcagcgg
cactgcattatagcgtacccgcgactgatcaattatggcgaaggctacgacgacatcatc
gacgccaatggcaaggacggaaatgcccttcccccgaccgctaacagtaagatggaggag
cactacaaaaagatgtacagcgatgagatgcaggttcgaaacatcgtcgaggttcttgat
cggtacaagcattccaaggatgccctggatcaagatgtctttgcatgcatgattcatgga
cttttcgacgagtacagccattacgtcgattatccactggaagcccttgccacaacagcc
gtgttgtttggcggcatcatctcgcacaagctcatttcaggcctgcctctccagatagga
cttgggatgatcttggaagcagttagggaccatgtgcccgacgatcccatgtacaagttc
ggtctgcaagcgctgatgcaactcctagtccggttccgggaatggccccttttctgtcgg
cagttggtcctgatcccgggacttatgggaacagaagcgcacaagaaggccgaggaggtc
gtgatggagcatgaagaagatctttctcgcggcccgaacggagcgggaacgccacatgga
gttggctatccaggagacacgtttcccaatggaaactctgaagaacaagccaatgcagac
cgccaggctcctgctttctcctccatcagtgtcgaccccccggcccccgagatggatttc
gaagaccccaacgaagtcgagcaggataaggtccagtttgttctcaacaacatcacggaa
ggaacactggtatcgatgtctagcgagctgcgagagaccctggagcgaaggcatcagcaa
tggttcgcctgccagcttgtcgaggagcgtgccaagatgcagccaaactaccatcatgtg
tatctcgaactcgtccggctcttggaggacacgtccctttggggcgaggtgctgcgtgag
acgtacgtcagcgtgtcccgcatgcttaactcagaggctacgatgcaaaactctacggaa
agaacgcatctcaagaatctcggcggctggctcggtctcatgactcttgcgcgcgatcga
ccgatcaagcacaggaacattgcattcaagcagctactgatcgaagcgcatgatacgaag
aggcttatcgtcgtcatcccttttgtgtgcaaagtccttgtccaaggtgccacatcggcg
gtattccggcctcccaacccttggctgatggatattatccacctactgatcgagctgtac
catcatgctgagctgaagctgaatctcaagttcgagattgaggtcctttgcaagggtctg
aatctcgatcacaagagcatcgagccctcgggagagatcctcaaccgaccggttatcgag
gaaccagcggatgttctacctcaagaacagatagatgcctttgaaaacctatctctgaac
ggcatgggatccgccgtcggcgctggcctctccccccaggccattgcaccaactattcca
gacctcggccccctcattaacattcccccaaccaacgagatggttgtcacctccacccga
ctccacgatattgtgcggaccgctctcagtcgagccctgcaggatatcattcagcctgtt
gtggaccggtccgtcactattgctgccatctcaacgcagcagatgattcacaaggatttc
gctaccgagcccgatgagaaccgcgtgcgaacctctgctatcaatatggtgaaagccaca
gcgggaagcctcgcgcttgttacgtccaaggagccacttcgagccaactttaccaattac
atgcggaacctgtcgaacgacattcctcaaggtctgccggagggcaccataatcatgtgc
gtcaactccaacctcgacttggcctgcaacatcatcgagaagcaggcagaggaaagggcg
gtgcctgagattgaggagatgatggagggagaactggaggctcgtcgaagacaccgaatg
cagcgacccaacgagccttacttcgactcgagcctcagccgctgggccatgacgatcccg
cacccgtacaagctctcgccaaccagcaacggattgaacagcgaccagatggccatatac
gaggactttgctcgacaaccccgcagcgccgctgcccctgctccctcccacggtccctcg
acatccgacgcgactagatctctcgccaacgaggtcttgcaggagcaattcacggctatg
cccaatataccaactcctgctgaaacccctgcgattcagcaacatctaagcactcagatg
cagccctatgccccggtccacgcaggagccaatgccatgtctaacggaaggtcgcctgga
ttcaccatggatgtccgcggcctagctgagcgagttaacaagctacttcaggaactcctg
agggtagcaaccgaggctcgcgaggatcatttccaaggcctaccacgaccccatcctgtc
ctggacgttgtcgatgctttggttcagcacatcatcaagacatcgcagaactcggaggaa
ttcgccatatacgccgctgagcagatcagccagattatcttctcgccggtagaggacaat
ttgacgctcgagagtctggttcatgttttggagacgttgagaaagatatccggccctgca
ctcaacaatcgtgtccgggctctgttcagccaacaaccagggcccaccttcttgagccta
ccattgctagcggcattgactcggactgacttgttggattggaggaacatcgatcttgcc
atgtccaaggccctccaggcccgtaaggagggctcgctcgacttcttggagcacatgctt
gaccttacgcttctcaacaaccgccctatcgccctgtatgctgattttgtcaggacgctg
gaggcagcatgggcttggatcagagaagaccccggctcggctattggtcaacgagtcagg
tccaagctgatcggctctggattgtcgcatccttcgcaggcagacgaccaggcactatat
cgacaagatcagatggactatgtgctggacgagtgggttcacctgtgcaacaaccacaat
gcttcggacgcgtctggatcgatcttcgtgcaacaactgcaggccaagcaggttatccga
gaccgtgatgatttcttcgtctttctccgtaccgccatcgatacatcggttgagcgattc
gagcacacgatgcaccctggcgctctcaccgatgtctacatcaccgtcgatgcgctcgcc
aaactcattggaacctttgtcagcttgcagtttgacacatcatccacgcgagcgtcattt
gtcgactcgaccatggcgctgatcacactggtcctaaaccatcacagcgtcaagcgaggg
gagcagcttaaccagagggtcttcttccgactgctgtcgatgctcttgcacgagatccac
gccatctcggaagacttttctgaagaggagcgccgcgacattttgctcaggatcgcctcc
cgacttgccggcatgggccctgctctcattcccggctttacctatggctggctctctctt
gttcagcaccgcgccttcatgccggtactcctccaactgcccgatggcgctggatgggga
ctgttcgtcgacctcgtgtgccagctctttgagtctcttggggatcagctgaaagtgttt
gaagtatccaacattgccaaggacatttaccgagccgcgttcaagcttctgatcatcctg
caacacgacttccccgatttcgtcgcggctaaccacgtcagaatttgcgccagcatcccg
ccgcactgcacacaattgatcaacgccgtgttggccgccaacccacagcagagtcccaag
tttgtcgagatgaatgccaaggatcgatccgacgagtccagggtccaccccggcctagtt
aacgaggccactgcaatcctccgagatgctggtctgctaggcgttgtcgaccaagccctc
cagagtggcccgtcagaggacattgtggctaacatcacgcactccatgacacacaacgct
cccaaagtgacaacatacggccatgtacctgttgcagttaaccttgccgtcatcaatgcc
gtggtcatctacatcgggcagcacgccgcggaccaggcagctcaggctggcacggctgtc
acagtatctggagacgagcatgaggtttcaactctgtccctcatcatccacgaactccct
gccgaggccaggtactatcttttggtcagcgtggtgaaccagctacgcttccccaacgcc
cacaccgactttttcagccaggccctcctctacatcttcagcaaggacctggaagatccc
gaggagacggagatccgacagggaatcacgcgggtcctccttgagcggctggttagtttc
tggccgcagccgtggggcttgctgtttacggttgtggagattgtcaagtgcgacaaatac
aatttctttgagctccctttcattaaggcgattcctgaggttgctgagaagtttggccag
gtggttcaacgaggttaa
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integrated database retrieval system
