Bernardetia litoralis: Fleli_0747
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Entry
Fleli_0747 CDS
T02149
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fli
Bernardetia litoralis
Pathway
fli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fleli_0747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fli03021
]
Fleli_0747
03400 DNA repair and recombination proteins [BR:
fli03400
]
Fleli_0747
Enzymes [BR:
fli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fleli_0747
Transcription machinery [BR:
fli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fleli_0747
DNA repair and recombination proteins [BR:
fli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fleli_0747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AFM03207
UniProt:
I4AGX2
LinkDB
All DBs
Position
845066..848929
Genome browser
AA seq
1287 aa
AA seq
DB search
MATLKHGRINFRKTTPILEYPHFLDVQVKSFQDFFQLGTPPEKRTADGLYKVFMENFPIS
DSRDNFVLEFVDYIIDPPKYSVQECVDRGLTYAVPLKAKLRLLCNDEDNEDFETIEQEVF
LGNVPVMTERGSFVINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWIEF
ATDVNNIMYAYIDRKKKFPVTTLLRAIGYGTDREILELFGLSEEVKATKANIQKVVGRKL
AARVLRTWTEDFVDEDTGEVVSITRNEVLLERDSAIEEEHIQTIIDSNTESIILHREDIN
INDFAIVYNTLQKDNSNSEKEAVEQIYRQLRNTEAPDEQTARDVIQSLFFSEKRYDLGEV
GRYRINRKLDLDLEMSVRVLTKEDIIRIIRHLITLINSRAVVDDIDHLSNRRVRTVGEQL
YSQFGVGLARMARTIKERMNVRDNEDFKPVDLINARTLSSVINSFFGTNQLSQFMDQTNP
LAEITHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHAT
VNGMGFIETPYRIVKNQKATDEVKFLTAEEEDEQIIAQANATLDSKNKFTSDLVKCRLEG
DFPLEAPENVTYMDVAPNQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLRPQAPIV
GTGLERRVAMDSRALVVAEDDGVIDYVDSKKIVVKYNWTKEQKLVNFDNEYTTYILTKFR
RTNQDTCINLRPIVLKGDKVKKGDVLCEGYATEKGELALGRNLMVAFMPWQGYNFEDAIV
ISERVVRDDIYTSIHIDQFELEVRDTKRGEEELTSEIPNVSEDAVKDLDENGIIRIGAKV
KEQDILVGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASMRASASLQGVVINTQLFSRP
KKDKDMRAKVRKQVDVLKKEYSRDLVGMRSQMISKMADLLEDKTSQGIVHKYGDVVLAKD
SGFNTQNIEQAFFPSKNAYRDESNYNVPEEVNFIADVILKDFTEDEDTNELLAELVKNYN
QKRNEITAEFKRQRFALEVGDELPAGIVKLAKVYVAKKRKLKVGDKMAGRHGNKGVVARI
VREEDMPFLADGRPVDIVLNPLGVPSRMNLGQIYETILGHAGLRMGTKYATPIFDGATEA
EVEAEIEKAGLPRWCKMEVFDGRTGVKFEQTVTVGIMYMLKLGHLVDDKMHARSIGPYSL
ITQQPLGGKAQFGGQRFGEMEVWALEAFGASHILREILTIKSDDVLGRAKAYECIVKGEN
MPEPNIPESFNVLIHELRGLALEITLD
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
ttggctacattaaaacacggcagaataaactttcgcaaaacgactcccattttagaatac
ccacacttcttagatgtgcaggtaaagtcgtttcaagatttcttccaactaggtactcct
cctgaaaaaagaacagcagacggactctataaagtatttatggagaacttcccaatttct
gattcaagagataactttgttttggaatttgttgattatatcatagaccctccaaaatat
tcggtacaagaatgtgttgatagaggtcttacttatgcagtgcctttaaaagcaaagcta
cgtttactttgtaatgacgaggacaatgaggatttcgaaaccatcgaacaagaagtattt
ttaggaaacgtaccagtaatgacagagcgtggctcttttgttatcaatggtgcagaacgt
gtcatcgtttcgcagcttcaccgttcaccaggagttttctttgctcaaagtaaacatact
aatggtacaaaattatattcagcacgtattattccattcaagggttcttggattgaattt
gcgaccgatgtaaacaatatcatgtacgcttacattgaccgtaagaaaaaattccctgtt
actactcttttacgtgctattggatatggtacagatagagaaattttggaactttttggt
ctttcagaagaagtaaaagcaacaaaagcaaatattcagaaagttgtaggtagaaaatta
gctgctcgtgtgcttcgtacttggacagaagattttgtagatgaggatacaggtgaagta
gtaagtattactcgtaatgaagtgcttttggagcgtgattcagctattgaagaagaacat
atccaaactatcattgattcaaatacagaatcaatcattcttcatagagaagatattaat
atcaatgattttgcgattgtctataatacattacaaaaagataattcaaattcagaaaaa
gaagctgttgagcaaatttatcgtcagcttcgtaatacagaagctccagatgagcaaaca
gctcgtgatgtaattcaaagccttttctttagtgaaaaacgttatgatttaggagaagtt
ggtcgttatagaatcaatagaaaattagatttagatttggagatgagtgttcgtgttctt
acaaaagaagacattattcgtatcatcagacatttgattactcttatcaattcaagagca
gttgttgatgatattgatcacctttctaatcgtcgtgtacgtactgtaggagagcagctt
tatagccaatttggtgttggtttggctcgtatggctcgtacaatcaaagaacgtatgaac
gttcgtgataatgaagactttaaaccagttgatttaattaatgctcgtactttatcgtca
gttattaattcattctttggtacaaatcagctttcacagtttatggatcaaaccaatcca
ttggcagagattacgcacaagcgtagaatgtctgctttagggcctggtggtctttctcgt
gaacgtgcaggttttgaggttcgtgatgttcactatacgcattatggtcgtttgtgtacc
attgaaactccagaagggccaaatattggtcttatttcttcgctttgtgttcatgcaact
gtaaacggaatgggctttatcgaaacgccttaccgtattgttaaaaatcaaaaagcaact
gatgaagttaagttcttgacagcagaagaagaagatgagcaaatcattgcacaggcaaat
gcaacattagatagtaaaaataaatttacttctgaccttgtaaaatgtcgtttggaagga
gattttcctttggaagctccagaaaatgtaacttatatggatgttgctccaaaccaaatt
gtttcggtagcagcttctcttattccattcttagaacatgatgatgcaaaccgtgccttg
atgggttcgaatatgcagcgtcaagcagtgcctcttttgcgtcctcaagctccaattgtt
ggaacaggtcttgaaagacgtgtagcaatggattctagagcattagtagtagctgaagat
gatggagtaattgactatgtagattctaagaaaattgtcgtaaaatataattggacaaaa
gaacaaaaactggtaaattttgataatgaatatacaacttatattctaactaaattccgt
agaacgaatcaagatacgtgtatcaatttacgtcctattgttttgaagggagataaagtc
aaaaaaggagatgttctttgtgaaggatatgcaactgaaaaaggtgagcttgcacttggt
cgtaacctaatggttgctttcatgccttggcagggttataactttgaagatgcaatcgtt
atttctgaacgagtagtaagagatgatatttatacttcaatccacattgaccaatttgaa
cttgaagttcgtgatacaaaaagaggagaagaagaattaacttctgaaattccaaatgta
agcgaagatgcagttaaagatttggacgaaaatggtattatccgtattggtgcaaaagta
aaagaacaagatattttagtaggtaaaattactcctaaaggagaaacagaccctacgcca
gaagaaaaacttcttcgtgcaatctttggagataaagcaggtgatgtaaaagatgcttct
atgcgtgcttcagcttcacttcaaggtgttgtcattaatactcagcttttctctcgtcct
aaaaaggataaagatatgcgtgcaaaagtacgtaagcaggttgatgtattgaagaaagaa
tatagccgagaccttgtcggaatgcgttcgcagatgataagcaaaatggcagacctttta
gaagataaaacttctcaaggaattgttcataaatatggtgatgttgttttggcaaaagat
tcaggtttcaatacacaaaatattgaacaagcattttttcctagcaaaaacgcataccgt
gatgagagtaattataatgttcctgaagaagtaaactttattgctgatgtaatcttgaaa
gattttacagaagatgaagatacaaatgagcttttggctgaacttgtaaaaaattataat
caaaaacgtaacgaaattacagcagaattcaaacgccagcgttttgccctagaagttggt
gatgagcttcctgctgggattgtaaaacttgctaaagtgtatgttgctaagaaacgtaaa
ctaaaagtaggtgataagatggctggtcgtcatggtaataaaggagttgtggctcgtatt
gttcgtgaagaggatatgcctttccttgctgatggtcgtcctgttgatattgtcttaaat
cctcttggtgtaccttctcgtatgaacttgggacagatttatgaaactattttaggacac
gctggtcttagaatgggaactaaatatgcaacaccaatttttgatggtgcaacagaagct
gaggtagaagctgaaatcgaaaaagcaggcttaccaagatggtgtaagatggaagttttt
gatggacgtactggtgttaagttcgaacaaacggttacagtaggaattatgtacatgctg
aaacttggtcacttagttgatgataagatgcatgctcgttctattggaccttactcgctc
attacgcaacagcctttgggtggtaaagctcagtttggtggtcagcgttttggtgagatg
gaagtttgggcattagaggcatttggagcttcacatatcttgagagaaatcttgacaatt
aagtcggatgatgttcttggacgtgctaaagcatacgaatgtatcgtaaaaggcgaaaat
atgccagagccaaatatcccagaatcattcaatgtattgatacacgagcttcgtggtctt
gcacttgaaattactttagactaa
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