Filimonas lacunae: FLA_1922
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Entry
FLA_1922 CDS
T05172
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fln
Filimonas lacunae
Pathway
fln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FLA_1922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fln03400
]
FLA_1922
Enzymes [BR:
fln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FLA_1922
DNA repair and recombination proteins [BR:
fln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FLA_1922
Prokaryotic type
FLA_1922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAV05910
UniProt:
A0A173MEG3
LinkDB
All DBs
Position
complement(2350656..2351327)
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AA seq
223 aa
AA seq
DB search
MDVKIEASWKEALHQEFSRPYFGEISAFLKTEKMQNKVIYPPGALIFNAFDKTPFDEVKV
VILGQDPYHGPGQAMGLSFSVPEGVTPPPSLVNIYKELHKDIGMIIPKTGDLTPWSKQGV
LLLNAVLTVRANEPASHSKVGWMSFTDAVIRKISDEKKGVVFLLWGKFAQEKQILIDETK
HHVLKAAHPSPFSADKGFFGCKHFSKTNELLAKQGLDPIDWTV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggacgttaaaatagaagccagctggaaagaggcattacaccaggaattttcccggcct
tatttcggagaaatatcggcctttttgaagacagaaaaaatgcagaataaggttatttac
cctccgggggcgctaatttttaacgcatttgataaaacaccttttgacgaagtgaaagtg
gtgattttgggccaggacccttaccatggcccaggccaggcaatgggtttaagcttttcg
gtacctgaaggcgttaccccgcccccttcactggtgaacatttataaagagttgcataag
gatattggtatgatcatacctaaaacaggcgatttaactccctggagcaaacaaggcgtg
ttgctgttaaacgccgtgcttacggtacgagccaacgaacccgccagtcatagtaaagta
ggctggatgagctttaccgatgctgttatccgcaaaatttcggacgagaagaaaggtgtg
gtattcctgttgtggggcaaatttgcacaggaaaagcaaatactcattgatgaaaccaaa
caccatgtactaaaagcggcgcacccctcgcctttcagtgccgataaaggcttttttgga
tgtaagcactttagcaaaaccaacgaactattagcgaagcagggattagacccaattgac
tggacagtataa
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