Fomitiporia mediterranea: FOMMEDRAFT_109599
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Entry
FOMMEDRAFT_109599 CDS
T03132
Name
(RefSeq) RNA-binding domain-containing protein
KO
K09564
peptidyl-prolyl isomerase E (cyclophilin E) [EC:
5.2.1.8
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_109599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_109599
03110 Chaperones and folding catalysts [BR:
fme03110
]
FOMMEDRAFT_109599
Enzymes [BR:
fme01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
FOMMEDRAFT_109599
Spliceosome [BR:
fme03041
]
Complex B
Other components
Prp19-related factors
FOMMEDRAFT_109599
Complex C
FOMMEDRAFT_109599
Chaperones and folding catalysts [BR:
fme03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
FOMMEDRAFT_109599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
18670439
NCBI-ProteinID:
XP_007267730
JGI:
Fomme1_109599
LinkDB
All DBs
Position
Unknown
AA seq
157 aa
AA seq
DB search
MEEGTKTKKTVFIGGIGDDIDEAAIYESFSTFGDILEVQIPPAQINTHNREEAQKHRGFA
FVTYTSSGDAQDAIDNMDMNELRGRVLRVNLARPQKLTAAVSGNRPIWESEEWLKQYAKP
LAQSGGVGSRAAIRAGASMEQEGEEKAEEARDDAMEE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggggacaaagaccaagaagaccgtcttcattggtggtataggagatgatata
gacgaggcagctatttacgagtcattctcgacgtttggtgacattcttgaggtacaaatt
ccaccagcacagattaacactcataatcgggaagaagctcagaaacatcgaggcttcgct
tttgtaacgtatacttcttccggtgatgcccaagatgcaatagacaatatggacatgaac
gaacttcgaggacgtgtcttacgcgtcaatcttgctcggccacaaaagctcaccgcggcc
gtctcaggaaacagacctatttgggaatcggaggaatggctcaagcagtatgcgaagcca
ttagcacaaagtggaggcgttggttctcgtgctgcgatacgtgctggtgcatctatggaa
caagaaggagaagagaaggcagaggaggctagggatgacgcaatggaggaatga
DBGET
integrated database retrieval system