KEGG   Fomitiporia mediterranea: FOMMEDRAFT_109599
Entry
FOMMEDRAFT_109599 CDS       T03132                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K09564  peptidyl-prolyl isomerase E (cyclophilin E) [EC:5.2.1.8]
Organism
fme  Fomitiporia mediterranea
Pathway
fme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOMMEDRAFT_109599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fme03041]
    FOMMEDRAFT_109599
   03110 Chaperones and folding catalysts [BR:fme03110]
    FOMMEDRAFT_109599
Enzymes [BR:fme01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     FOMMEDRAFT_109599
Spliceosome [BR:fme03041]
 Complex B
  Other components
   Prp19-related factors
    FOMMEDRAFT_109599
 Complex C
    FOMMEDRAFT_109599
Chaperones and folding catalysts [BR:fme03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    FOMMEDRAFT_109599
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM
Other DBs
NCBI-GeneID: 18670439
NCBI-ProteinID: XP_007267730
JGI: Fomme1_109599
LinkDB
Position
Unknown
AA seq 157 aa
MEEGTKTKKTVFIGGIGDDIDEAAIYESFSTFGDILEVQIPPAQINTHNREEAQKHRGFA
FVTYTSSGDAQDAIDNMDMNELRGRVLRVNLARPQKLTAAVSGNRPIWESEEWLKQYAKP
LAQSGGVGSRAAIRAGASMEQEGEEKAEEARDDAMEE
NT seq 474 nt   +upstreamnt  +downstreamnt
atggaggaggggacaaagaccaagaagaccgtcttcattggtggtataggagatgatata
gacgaggcagctatttacgagtcattctcgacgtttggtgacattcttgaggtacaaatt
ccaccagcacagattaacactcataatcgggaagaagctcagaaacatcgaggcttcgct
tttgtaacgtatacttcttccggtgatgcccaagatgcaatagacaatatggacatgaac
gaacttcgaggacgtgtcttacgcgtcaatcttgctcggccacaaaagctcaccgcggcc
gtctcaggaaacagacctatttgggaatcggaggaatggctcaagcagtatgcgaagcca
ttagcacaaagtggaggcgttggttctcgtgctgcgatacgtgctggtgcatctatggaa
caagaaggagaagagaaggcagaggaggctagggatgacgcaatggaggaatga

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