Fomitiporia mediterranea: FOMMEDRAFT_152473
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Entry
FOMMEDRAFT_152473 CDS
T03132
Name
(RefSeq) methionyl tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00450
Selenocompound metabolism
fme00970
Aminoacyl-tRNA biosynthesis
fme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FOMMEDRAFT_152473
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FOMMEDRAFT_152473
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fme01007
]
FOMMEDRAFT_152473
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_152473
Enzymes [BR:
fme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
FOMMEDRAFT_152473
Amino acid related enzymes [BR:
fme01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FOMMEDRAFT_152473
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FOMMEDRAFT_152473
Prokaryotic type
Other AARSs
FOMMEDRAFT_152473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
WHEP-TRS
tRNA-synt_1
Anticodon_1
Zn_ribbon_6
NPV_P10
DZR
Motif
Other DBs
NCBI-GeneID:
18674025
NCBI-ProteinID:
XP_007263379
JGI:
Fomme1_152473
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MAQKIRSAEGLLRQVVPKGEPILPKDGEKNVLITSALPYCNNVPHLGNIIGSTLSADVFA
RYNRTRNRRTLYVCGTDEYGTATETQALKEGITPKELCDKYHLLHRATYDWFEIAFDHFG
RTTTPQHTEISQGIYKNLSKNGLLSKQTKEQTYCEGCQKFLADRFVEGTCPHCGADDARG
DQCDVCSRTLDAIELINPRCLVNKEHKVVARESAHMYVRLDSVQPRTEEWIKRSWKAGGW
SANAVINSDGVLVDARLKGGLRPSPVTRDLTWGVPVPDIEGADNQEMKGKVLYVWFDAPI
GYPSITANYTPEWEKWWFNPEHVRLYQFMGKDNVYFHTIFFPSIQLGDGRDWTLLHHLST
TEYLNYEGGKFSKSHNRGVFGPAAKETGIPVSVWRYYLLSSRPETQDAMFSWAECIAANN
NILLKNFGNFVNRVLTFVAKNYDGILPDGGDSEGPISPNGEHDADFVSDVNSLLQQYIDA
LESVKLRLGLHIIMQISSRGNLYLQSSGLGSALKDSSPKRCAQVLCRAVNLIYILSVLVE
PFMPATAKAILAQLNAPQRTVPEALGIDILPGHTLGKPAHLFKPIKEEMAETWRAQFAGT
KKDQTGNGPLPSEAAPAPALSKRKAAAAAKAAAKKNEEYTGPKTPEIVALETKIAAQGDL
VRTLKAEMPKTKEIDDELVAAVEELKKLKTDLAQEIKILQAA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagattagatctgcagaaggtctcttgcgtcaggtcgtacctaagggtgaa
ccgatattgccaaaggacggcgagaaaaacgttcttatcacgtctgctttaccgtattgt
aataatgtaccacatcttgggaatatcatcggaagcacactgagtgctgacgtgttcgcg
agatacaatcgaacacgaaatcgacgtacactgtacgtttgtggtacggatgagtatggg
acggcaacggagacgcaagctttgaaggaagggatcacgccgaaagagctttgcgataag
tatcatttgttacatcgggcaacatacgattggtttgagatcgcatttgatcattttggg
agaacaacgacaccacagcatacagagatttcccaaggaatttacaagaatctgagcaag
aatggtcttctttcgaaacaaacgaaagagcaaacttattgtgaagggtgtcaaaaattc
cttgccgatcgtttcgtcgaaggaacttgtcctcattgcggagctgatgacgcacgagga
gatcaatgcgacgtctgcagtcgcaccctcgacgctatcgaactcatcaatccacgatgt
ctcgtcaacaaagagcacaaagtagtagctcgtgaatctgcgcacatgtatgtacggctc
gactcggtacaaccgcgcacggaggaatggataaaacgatcgtggaaagctggcggttgg
tcagcaaacgcggtgatcaacagtgatggcgtcttggttgatgctcgattgaagggtgga
ttacgaccgagccctgttacgcgagacttgacgtggggtgtgcccgttcccgatattgag
ggtgcggataaccaagaaatgaaggggaaagttttatacgtttggttcgatgcacccatt
ggatacccaagtatcaccgctaactataccccggaatgggaaaaatggtggttcaatcca
gaacatgttcgtttataccagttcatgggcaaggacaacgtatacttccataccatcttc
tttccgtcgattcaactaggagatggaagagactggacgttgctgcaccatctttccacc
acagagtaccttaactatgaaggcgggaagttttcgaagagccataatcgtggcgtcttt
gggcctgcagcgaaagagacgggaatccctgtgtctgtctggcgatactacctgttatct
tcacgacctgaaactcaggacgccatgttctcatgggcggaatgtattgccgcaaacaac
aacattctcttgaagaacttcggaaacttcgttaaccgagttctaactttcgtcgcgaag
aattatgatggcatccttcctgacggcggtgattcggaaggtcctatatcacccaatggt
gagcacgatgcggacttcgtttcggacgtcaacagtctcttgcaacaatacatcgacgca
ctagagtctgtaaagttacgtttgggcttgcacatcatcatgcaaatatcctctcgcggc
aacctttatctccaatcctccggtctaggttccgcgttgaaagactccagcccgaagcga
tgtgcccaggtactctgccgcgcagtgaatcttatctacatactttctgtgctcgtggaa
ccattcatgccggcaaccgccaaggccatcttggcgcagctcaacgcgccgcaacgtaca
gtaccagaggcacttggcattgatatcttacctggtcacacgctagggaagcctgctcat
ctgttcaaacccatcaaggaagagatggcagagacttggcgggcgcagtttgctgggacg
aagaaggaccagacggggaatgggccattgccctctgaggcggctccggctccggcactt
tcgaagcgtaaagctgcagccgcagcgaaagcagctgcgaagaagaatgaggagtatact
ggcccgaagacacctgagatcgtcgcgcttgagacgaagattgctgcccagggcgatcta
gttcggacactgaaggctgagatgccgaagacgaaggagatagacgacgaattagttgct
gccgtagaggagttgaagaaactcaagactgaccttgcacaagagataaagattttacaa
gcggcttga
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