Fomitiporia mediterranea: FOMMEDRAFT_155271
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Entry
FOMMEDRAFT_155271 CDS
T03132
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
fme
Fomitiporia mediterranea
Pathway
fme04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FOMMEDRAFT_155271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fme04121
]
FOMMEDRAFT_155271
Ubiquitin system [BR:
fme04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
FOMMEDRAFT_155271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
OTU1_UBXL
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
18674465
NCBI-ProteinID:
XP_007265753
JGI:
Fomme1_155271
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKN
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLGEL
GLAHITANGANILDSAALTRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagacgctcacgggcaagaccatcaccctcgaggtcgagtcgtcc
gatacgatcgacacggttaagaacaaaattcaggataaggaaggcattcctcctgaccaa
caacgcttgatcttcgccgggaagcagctcgaagatggccgcaccctatccgattacaac
atccagaaggagtcgacgctccatcttgtcctgcgtctccgtggtggaatgcagatcttc
gtgaagacgttgactggaaagaccatcactctcgaggttgaatcttccgacaccattgac
acggtcaaaaataagattcaggacaaggaaggtattcctcccgaccagcagcgcctcatc
ttcgccgggaagcagcttgaggatggccgtaccctttctgactacaacattcagaaggaa
tctactctccaccttgttcttcgtcttcgtggtggtatgcagatcttcgtcaagacgttg
acaggcaagaccatcaccctcgaggtcgaatcttcggatacaatcgacacggtcaaaaat
aagattcaggataaggagggcattcctcccgatcagcaacgattgatcttcgccggcaag
cagctcgaagatggacgaaccctgtcggattacaacattcagaaggagtcaacgttgcac
ttggttcttcgtctccgtggcggtatgcagatcttcgtgaagactttgactgggaagacg
atcacgcttgaggtggaatcttccgacaccatcgacacggtcaaaaataagattcaggat
aaggaaggtattcctcctgaccagcagcgtttgatcttcgctggtaagcaactcgaggat
ggtcgtactctatcagattacaacatccagaaggagtcgactcttcaccttggtgagttg
ggtcttgctcacatcactgccaacggtgctaatattcttgacagtgctgcgcttacgcgg
gggtaa
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