Fomitiporia mediterranea: FOMMEDRAFT_71660
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Entry
FOMMEDRAFT_71660 CDS
T03132
Name
(RefSeq) VHS-domain-containing protein
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
fme
Fomitiporia mediterranea
Pathway
fme04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
FOMMEDRAFT_71660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_71660
Membrane trafficking [BR:
fme04131
]
Endosome - Golgi transport
Others
GGA
FOMMEDRAFT_71660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
FdhE_N
Motif
Other DBs
NCBI-GeneID:
18679524
NCBI-ProteinID:
XP_007261684
JGI:
Fomme1_71660
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MSVFSGDFLRNVSPLQNLIARAVDPYKIEPDYAAHLEVAEYINKKKANTPREAAMSIARI
VNNRNPHISLLALALLETLVQQCGYAFHLQIATKEFLNELVRRFPERPPPFPGPVMTKIL
ELIRTWYTTICVESRWKEDLGNIRDMHRLLTFKGYRFRGDVAHTQPAVASTSNLKSAEEL
EEEDREAQQAKLQELIRRGTPRDLAAAQELMKVLAGAEPDKKPDYRAQSLTELNKLEQKV
ILLNEMLDNVDIERGERFASGDAYDQVSNILSAARPRIQKWISDAESNDPEMLDIFLQLN
DQINSVLNRYEAFKKGDFTAAKNPIPAELAR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttcagcggcgattttttgaggaatgtctccccgttgcagaatttgattgca
cgagctgtggatccatacaaaattgagccagattatgccgcacaccttgaggtggcggaa
tacatcaataagaagaaggcgaacacacctcgagaagcggcgatgtccattgcacgtatt
gtgaataatcgcaacccccacatctccttgcttgcgctcgcactcctcgagacgcttgtc
cagcaatgcggttacgctttccacttgcagatcgcaacgaaggaattcctcaatgagctc
gtgcgtcgcttccccgagcgcccacctccattcccgggacccgtcatgacgaagatcctt
gagctcattcggacatggtatacgacaatatgcgtggagagcaggtggaaggaggacctg
gggaatataagagatatgcatcggctgttaacattcaaaggctacaggttcaggggtgac
gttgctcatactcagccagctgtcgcgtcaacatcgaacctgaaatccgctgaagagctt
gaagaggaagatcgagaagctcagcaagcaaagctgcaagaacttattcgccgtgggacg
ccccgcgatctcgcagccgctcaggagctcatgaaagtgcttgctggtgcagagcctgac
aaaaagcccgactatcgcgcacaatcgttaacggagcttaataaattagaacagaaggtt
attttgctgaacgaaatgcttgataatgtcgatattgaacgtggggagcgatttgctagt
ggagatgcgtatgatcaagtcagcaatatcctatctgctgcacggcctagaatacaaaaa
tggatatcggatgcggagtctaatgacccggagatgctagatatctttttgcagttgaat
gatcaaataaactcggtattaaatcgttacgaggccttcaagaaaggtgacttcacagct
gccaaaaatcccatacctgcggagctcgcaaggtaa
DBGET
integrated database retrieval system
