Fidelibacter multiformis: FMIA91_15730
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Entry
FMIA91_15730 CDS
T10786
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fml Fidelibacter multiformis
Pathway
fml03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fml00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FMIA91_15730 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fml03021
]
FMIA91_15730 (rpoB)
03400 DNA repair and recombination proteins [BR:
fml03400
]
FMIA91_15730 (rpoB)
Enzymes [BR:
fml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FMIA91_15730 (rpoB)
Transcription machinery [BR:
fml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FMIA91_15730 (rpoB)
DNA repair and recombination proteins [BR:
fml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FMIA91_15730 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
DUF7605
Motif
Other DBs
NCBI-ProteinID:
BFN37694
LinkDB
All DBs
Position
complement(1895000..1898815)
Genome browser
AA seq
1271 aa
AA seq
DB search
MRNLSGLIQRKSFSRISRVLDIPDLLSIQLDSFNEFLQLDKKPEERENIGLEQAFRAIFP
IEDSHNTFALDYVSYSIGKPRYSEKECLERGITYAAPLKAKLILKIAEEDAEPGVYSESI
EQEVFLGNIPFMTNRGTFIINGAERVIVSQLQRSPGVFFNDARHPNGSILYNARIIPFRG
SWVDITTDIFDAIYVTIDRRKKFPVSILLRAVGFDSDYDILKQFDVLKEVTVSNKIIGMT
LVQSILNPDTGEVILAAGVSEDDRVVLEASHVQTLKEAGIKKIEVVDPDKEIDLKLLANS
IRREKDKMDPERLAEGGPNQEDALFYLYRNLRNGDPPNLETAQKFVEKLFFSPKKYDLGE
VGRYRMNKKFNMDVPLDNTVITPDDFIYIVQHLIKMRRGDKLSDDIDHLGNRRVRTVGEQ
LANQFSIAFTRMSRTIRDRMNIHRAENLTPQELVNSRIITSVINTFFGTSQMSQFMDQTN
PLAELTHKRRLSALGPGGLTRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLASYA
VVNRLGFIETPYRKTQVKDNKAFVTEEVEYLSADDEDRSVIAQANAPLNKDNSFALDVVK
CREGADYPAVAPEKVNYMDVAPIQIVSAAASLIPFLEHDDANRALMGSNMQRQSVPLLTP
STPIVGTGMEGIIAADSRAIVVADTDGVIEYVDANKIILRPLEGFDASVSLDENEGRHVY
HLKKYQRTNQDTAINQRPIVRKNQVVKKGQPLADGTSTNKGELALGRNVLVAFMPWRGYN
FEDAIVLSERMVKEDIFTSVHVKEVELEVRETKRGSEELTREIPNVSEEATKNIEENGII
RVGAQVKSGDILIGKVTPKGETDPTPEEKLLRAIFGEKAGDVKDASKRAEPGTSGVVIDT
RLFVRKGKESRRDEKIKIEKLDNELTRRLAALKGKLTRKLLGLLEGHACTGIYDKGGNAI
VAEGREWNAEIFENMDFRRVDLDKPWIKDEKQYQKVLTLIQNFQNVQQDIQYEIDNEKFK
VKAGDDLQPGVLQLAKVYIASKRKIQVGDKMAGRHGNKGVVSIIVPEEDMPYLPDGTPVD
IVLNPLGVPSRMNLGQLYETMLGWAGKKLGIYYETPVFDGARYGDVQEELKKAGLPENGK
SELYDGRTGEKIYDTVAVGQIYMMKLAHMIEDKMHARSTGPYSLITQQPLGGKAQFGGQR
FGEMEVWALEAYGAAFTLQEVLTVKSDDVDGRSRVYNAIVKGENLPDYGMPESFNVLLKE
LQGLGLEVDLL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatctgtcaggacttatacagcggaaatctttctcccgaatctcaagggttttg
gatatccccgatttgctgagcattcagctcgattcatttaatgaatttttgcagttggat
aaaaaacccgaagaacgggagaatattggcctggaacaggccttcagggcgatttttccc
atcgaggactcccataatacctttgcattggattatgtgagttattccatcggaaaacct
cgctattctgaaaaagaatgcctggaaaggggtatcacctatgctgcccccttaaaggca
aaattaatcttaaaaattgccgaagaagatgcagaacccggtgtctattcagagagtatt
gaacaggaagtgtttctgggtaatattccctttatgaccaaccgggggaccttcattatt
aatggagcggaacgggttatcgtcagccagcttcagcgttctcccggtgttttctttaac
gacgcacgccatcccaacggttccatcctctacaatgcccgtattattcccttccgtggc
tcctgggtagatattacgacagatattttcgatgcaatttatgtcactattgacagacga
aaaaagtttcccgtctctattctcctccgtgcagttggatttgattccgattacgatatt
ctaaaacagtttgatgtactgaaagaagtcactgtctcaaataaaatcattgggatgacc
ctggttcaaagcattctgaatcctgataccggagaagtgatcctggccgccggcgtttct
gaagatgaccgggtcgttcttgaagcttcacatgttcagacgctgaaagaagccggaatt
aaaaaaattgaagtggttgatccggataaggaaatcgatctgaaacttctggccaactcc
atccgccgtgaaaaggataaaatggatccggaacggctggctgaagggggaccaaatcag
gaagatgctcttttctacctgtaccggaatttgagaaatggagatccaccgaatctggaa
acagcccagaaatttgtggaaaaactctttttcagtccgaaaaaatatgacctgggtgaa
gtggggcgttaccggatgaacaaaaagttcaatatggatgtcccccttgacaatacggtg
attactccggatgattttatctacatagttcagcacctgatcaagatgcggcgcggagat
aaactctctgatgatatcgaccatttgggaaaccggcgtgtgcgaactgtgggcgaacaa
cttgccaatcagttctccattgcctttacccgcatgtcacggacgatccgggaccggatg
aatatccacagagcagaaaacctcacaccccaggaactggtgaacagccggattatcaca
tccgtcatcaataccttttttggtacctcgcagatgtcccagtttatggatcagaccaat
cctctggctgaactgacccacaagcgtcgtctgtctgccctgggtccgggaggattgaca
cgtgaacgggccggttttgaggtccgtgatgtgcactatactcactatggccgcttgtgt
cccatcgaaaccccggaaggaccgaatatcggtttgatttcatcactggcttcttatgcg
gtggtgaaccgcctgggctttattgaaacaccgtaccggaaaacacaggtgaaggataat
aaagcgtttgtgacggaagaggtggaatatctctctgctgatgatgaagacagaagtgtg
attgcccaggcaaatgcacctttgaataaggacaactcttttgccctggatgtggttaag
tgccgggaaggcgccgactatccggcagttgctccggaaaaagtgaattacatggatgtg
gccccaattcagattgtcagcgccgcagccagtctgattccttttctggaacatgatgat
gctaaccgtgccctgatgggaagtaatatgcaacgtcagtctgtgccgctgctgactccc
agtacccctattgtgggaacagggatggaagggattatcgctgcagacagccgggcgatt
gttgtagccgatacagatggcgtcattgaatatgtagatgccaataaaattatcctccgt
cctctggaaggttttgatgcctccgtttccctcgatgaaaacgagggtcgacatgtgtat
catctgaaaaaatatcagaggaccaaccaggatacagccatcaatcaacggccgattgtt
cggaaaaatcaggttgtgaaaaaagggcaacccctggcagacggaacatctaccaataaa
ggggaactggccctcggccgaaacgttttggtggcttttatgccctggcgtggttataac
ttcgaggatgccattgttctcagtgaacggatggtaaaagaggatatcttcacttcggtt
cacgtgaaggaagtggaactggaagtccgggaaacaaaacggggaagcgaagaactgacc
cgtgaaatccccaatgtctcggaagaagccacgaaaaatattgaggaaaatggaattatt
cgcgtcggtgcccaggtaaagtccggggatatcctgattggaaaagttacgcccaaggga
gaaaccgatccgactccggaagagaaactgctccgggccatcttcggtgaaaaagccggg
gatgttaaggatgcttccaaaagggctgaaccggggacatccggtgtggtgattgatacc
cgcctctttgtccgtaagggcaaagaatcccgccgggatgaaaaaataaaaatcgaaaaa
ctcgataatgaattgacacgccgcctggcagccctcaaagggaaactaacccggaaactt
ctgggactcttggagggacacgcctgtaccggaatctacgacaagggtggcaatgccatt
gtggctgaaggccgtgaatggaatgccgagatctttgaaaatatggatttccggcgtgtg
gatctggataaaccctggatcaaggatgaaaaacagtatcaaaaggtgttaaccctgatc
cagaattttcagaatgtccagcaggatattcaatatgaaatcgataatgaaaagttcaag
gtcaaagccggtgatgaccttcagccgggagtcctccagctggccaaagtatatatagcc
agcaaacggaaaattcaggttggagataagatggccggccgccatggaaacaagggtgtt
gtatccattatcgttcccgaggaagatatgccctatctgccggacggaactcctgtggat
atcgtcctgaatccactgggtgtgccttcccgtatgaaccttggacagctgtacgaaacc
atgttgggctgggccggtaagaaactgggtatttactatgaaacaccggtttttgacgga
gcccgctatggggatgtgcaggaagagctgaaaaaagccggtctgcctgaaaatggaaaa
agcgaattgtacgacggccgaaccggtgaaaagatctacgatacagttgctgtgggacag
atttacatgatgaaactggcccacatgattgaagataaaatgcatgcaagatcaaccggt
ccctattcactgattacgcaacagcccctgggtggaaaagcccagttcggaggtcagcgt
ttcggtgaaatggaagtctgggcccttgaagcatacggtgccgctttcactttacaggaa
gttctgaccgttaaatccgatgatgtggatggcagatcccgtgtgtataacgccatcgtc
aaaggggaaaatcttcccgattacggtatgccggaatcatttaacgtgttgctgaaagaa
cttcagggactgggtctggaagtggatcttctgtaa
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