Fuerstiella marisgermanici: Fuma_05727
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Entry
Fuma_05727 CDS
T04678
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fmr
Fuerstiella marisgermanici
Pathway
fmr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fuma_05727 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fmr03021
]
Fuma_05727 (rpoB)
03400 DNA repair and recombination proteins [BR:
fmr03400
]
Fuma_05727 (rpoB)
Enzymes [BR:
fmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fuma_05727 (rpoB)
Transcription machinery [BR:
fmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fuma_05727 (rpoB)
DNA repair and recombination proteins [BR:
fmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fuma_05727 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
APZ96064
UniProt:
A0A1P8WPT0
LinkDB
All DBs
Position
complement(7637346..7641068)
Genome browser
AA seq
1240 aa
AA seq
DB search
MPVPSVRTIDQDTVRNFGKIQADYEITALTRIQTESYARFLQLDRTSRDRLEQGLEGILR
EVFPIESYDGQFRLEYVRYELGKPRYTPAECRQLRLTYGMPFRVWLRLIKEQPVEEEVYL
GDIPIMIGGGEFIVNGAERVVVSQLHRSPGVDFVMAEETASSDRKTQSCRIIPERGSWIE
LICTKKDAVAVRIDQSGKFAALTLLRAMSPDYSSDAALIRLYHNTEELKITSKSDPKTLL
GQWVVEDIVYPEQHDLAGEILCDAGCQLTEVMVEALLASGLKSIEVAIDVEDPLILNTLA
EDTTATHEEALLRIYQRLRPGNPPNLDKAADLFKEKFFDLNRYRLGRVGRFRINRKFNQE
VPDDEMTLRPEDFINAIRYLMRLRLNDETAHIDDIDNLGNRRLRTIDELAADEIRKGFLK
LRRTVQERMSLKEVDGMTPRTLINPKSVSAAIDFFYGRSELSQVVDQTNPLSMLTHERRL
SALGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLGIFSKVDDYGFLITP
YRKVTDGKVTDEVVWLRADEESFVHVAPADTPIKDGALVADLVLARYKSDVVWIPKAKVE
FTDVAPCQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLITERPVVGTGMEDYVAQH
SGMLLRAEKAGTVTYVDANNIEIDGRRFPLRKFVRLNERTCLNQKPIVSVGDKVKAGQLL
CDSAATKRGTLALGRNVMVAFMSWSGYNFEDAIILSERLVKEDVYTSIHLDEFDVEIRET
KLGREEFTRDIPNVSEKALHHLDDDGIVRIGTRVLPGDILVGKVSPKAKSELTPEEKLLH
AIFGRAGEDVKNESLEVPSGVGGIVIHTERFSRRMSLSDIERKKFEDELKKVEQEGDARI
TEVFRTFAKSMKAELGDALTDPDGRDMGTLEDEKAVAEFARGFLGYFEGLDIRSAQKKTA
ARKLIKEEWPAVEVVIDDEDHRLNSMKRGDELPSGVLQMVKVYVASKRHISVGDKMAGRH
GNKGVISKVLPVEDMPYLEDGTPIDIILNPLGVPSRMNVGQILETHLGWAAGKLGYRAIC
PVFDGATEEEVRAALREADLPEEGKAFLRDGRTGDVMEQKTTVGNIYMLKLHHLVDDKVH
ARATGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKI
YESMVKGENTLEAGTPASFDVLNNEIRGLCLNLQLEKTNH
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaccctctgttcgtactatcgaccaggacacggttcggaacttcggcaaaatt
caggctgactatgagatcactgcgctaacacgcattcagactgaatcttacgcgcgattc
ttgcagctggatcgcacatcaagagatcgccttgaacagggtttggaagggattctccgt
gaagtcttcccgatcgaaagttacgacgggcagtttcgtcttgaatacgttcgatacgag
ctgggaaaacctcgttacacgccggctgaatgtcgtcaacttcggttgacgtacggcatg
ccgtttcgagtctggttgcgacttatcaaagagcagccggtcgaagaagaagtgtacctc
ggcgatattcccatcatgattggcgggggtgagttcatcgtcaacggggctgagcgagtt
gtcgtgagccagttgcatcgttcacccggcgtggactttgtcatggccgaagaaacggcc
agcagcgaccgaaagacgcagtcgtgccgtatcattcctgagcgtggtagctggatcgag
ttgatctgcacgaagaaggatgccgtcgctgttcgaatcgaccagagcggaaagttcgcg
gcgttaacgctgctgcgagcgatgtcacctgactattcgtccgacgcggcattgatccga
ctgtatcacaatacagaagagttgaagatcacttcaaagtctgatcccaagaccttgctg
ggccaatgggttgttgaggacattgtctatccggaacagcatgatctggccggtgaaatc
ctgtgcgatgccggctgccagctgacggaagtcatggtcgaggccctgctggcttctggc
ctgaagtcgatcgaagttgccattgatgtagaggatccgctgattctgaacacattggct
gaggacaccacggcaactcacgaagaagcacttcttcggatctaccagcgtctacgccca
ggcaacccaccgaatctggacaaagcggccgatctgttcaaagaaaaattctttgacctg
aaccgttatcgcctcggtcgagttggtcgattccgcatcaatcgcaagttcaatcaggaa
gtccctgatgacgaaatgaccttgcgtcctgaagacttcatcaacgccattcgttatctg
atgcgactgcgtctgaatgatgaaaccgcgcacattgacgacatcgacaacctcggaaat
cgtcgcttgcgcacgatcgatgagctcgctgcagacgaaatccgtaagggcttcttgaag
ctgcgtcgcacggtgcaggaacgcatgagcctgaaggaagtcgacggcatgacgccgcgc
acactgatcaatccgaaaagtgtttcggcggcgatcgatttcttctatggtcgaagcgaa
ttgtctcaggtcgttgaccagacgaatccgctttccatgctgactcacgagcgtcgctta
agtgctctcggcccaggcggcctgaaccgtaaacgagcgggcttcgaagttcgtgacgtt
catatttctcactatggtcgaatttgtccgatcgaaacgccggaaggcacgaacatcgga
ctgatttccagcttgggaatcttctccaaggttgacgattacggttttctgatcaccccg
tatcgcaaagtcaccgacggtaaagtgacggacgaagtcgtgtggctgcgagccgacgaa
gaatcgttcgtgcacgtggctccagcggatacgccgatcaaagacggtgcgctcgtcgca
gacctggtactggctcgttacaagagcgacgtggtttggattcccaaagcgaaagtagaa
ttcactgacgttgctccttgccaaatggttggagtctctgccgggttgattccgttcctt
gagcacgacgatgcaaaccgagcgttgatgggctcaaacatgcaacggcaggctgtgccg
ctgctgatcacggaacgacctgtggtcggtaccgggatggaagattacgtggctcagcat
tcaggcatgctgctgcgggcggaaaaagccgggactgtgacctacgtcgatgctaataac
atcgaaatcgatggccgtcgatttccgctgcgaaagttcgtgcgtctaaacgaacgcacc
tgcctgaaccagaagccaatcgtttccgtcggcgacaaggtgaaagccggtcaactgctg
tgcgacagtgcggcaaccaagcgaggcacactcgcgttgggccgaaacgtgatggtcgcc
ttcatgtcgtggtctggctacaacttcgaagacgctattattctgtccgaacgccttgtg
aaggaagacgtttacacgtccattcacctggatgagttcgacgtggaaattcgcgaaacc
aagctggggcgggaagagttcactcgtgacatccccaacgtcagcgaaaaggcactgcac
cacctcgatgacgacggaatcgtgcggattggtactcgcgtgctccctggcgacattctg
gtcggcaaggtatcaccaaaagccaagtctgagctgacaccggaagaaaagctgctgcac
gcgatcttcggtcgagcgggcgaagatgtgaagaatgaatcgctggaggtccccagcggt
gtcggcggaattgtgattcacaccgaacgcttttctcgtcgcatgagcctttcggacatc
gagcgtaagaagttcgaagatgaactgaaaaaggttgagcaggaaggcgacgcccggatc
acggaagtcttccgcacattcgccaaatccatgaaggcggaactgggagacgctttgacc
gacccggatggccgcgacatgggcacgctggaagacgaaaaagctgtcgccgaattcgcc
cgcggattcctcggctactttgaagggctggacattcgcagcgctcagaagaagacggct
gctcgcaaactgatcaaggaagaatggcctgccgttgaggttgtcatcgacgacgaagac
caccgtctgaacagcatgaagcgaggcgacgaattgccgagtggtgtgctgcagatggtc
aaggtctatgttgcatccaagcgtcacatctccgtcggcgacaagatggctggacgccac
gggaacaagggtgtgatttcgaaggtgctgcctgtcgaagacatgccgtacctggaagac
ggcacaccaatcgacatcattctgaacccgctgggtgttcccagccgaatgaacgtcggc
cagattcttgagactcatcttggctgggcggccggcaagctgggctaccgagccatctgt
cctgtgtttgacggtgcgaccgaagaagaggttcgtgcggcgttacgagaagccgacctg
ccggaggaaggcaaggcctttctgcgtgacgggcgaactggcgacgtgatggaacagaag
acgacagtcggcaacatctacatgttgaagctgcatcaccttgtcgacgacaaggtccac
gcccgagcgacgggtccatactcactgattacgcagcagccactcggcggtaaagctcgc
ttcggcggtcagcgtttcggagaaatggaagtgtgggcactcgaagcctatggggccgcc
tacatccttcaggaattattgacggtgaagagcgacgacgttgaaggtcgtaccaagatc
tacgagtcgatggtgaagggtgagaatacgcttgaggccggcacacccgccagttttgac
gtgttgaacaacgagattcgcggcctgtgcctgaatctgcagctggaaaaaacgaaccac
tag
DBGET
integrated database retrieval system
