Fusobacterium vincentii 3_1_36A2: HMPREF0946_01758
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Entry
HMPREF0946_01758 CDS
T02822
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fnc
Fusobacterium vincentii 3_1_36A2
Pathway
fnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0946_01758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnc03019
]
HMPREF0946_01758
Messenger RNA biogenesis [BR:
fnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0946_01758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH-I_KHDC4-BBP
KI67R
Motif
Other DBs
NCBI-ProteinID:
EEU31897
UniProt:
C7XRZ1
LinkDB
All DBs
Position
208511..210076
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AA seq
521 aa
AA seq
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MDLLIFLGLGVFALALIFAVFFKKIVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAERDAV
SKAKEIELKAKEKAYQIKEEVEKEARNSKNEIAQKEARIIKKEEILDGKIEKIEIKSLEL
EKINDELEEKKKEIDVLKVKQEEELTRVSELTKADAREILLHKVREEMTHDMAVTIREFE
NKLNEEKEKIGQKILSTAIGKAAADYVADATVSVINLPNDEMKGRIIGREGRNIRTIEAL
TGVDVIIDDTPEAVVLSCFDGVKREIARLTIEKLITDGRIHPGKIEEIVNKCKKDIEKEI
VAAGEEALIELSIPTMHPEIIKTLGRLKYRTSYGQNVLTHSIEVAKIASTMAAEIGANVE
LAKRGGLLHDIGKVLVNEIETSHAIVGGEFIKRFGEKQDVINAVMAHHNEVEFETVEAIL
VQAADAVSASRPGARRETLTAYIKRLENLEEIANSFEGVESSYAIQAGRELRIVINPDKV
SDDEAILMSREVAKKIEDTMQYPGQIKVTILRETRAVDYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatttactgatatttttaggattaggtgtgtttgcattagcactaatctttgcagtc
ttcttcaaaaagatagttatagataggcagattgaaaagctaaatgatttagaagatgaa
gttgagaaagctaagttaaaagctaaagaaatagttgaagaagctgaaagagatgctgtt
tcaaaagctaaggaaatagaattaaaagctaaggaaaaagcataccaaataaaagaagag
gttgagaaagaagctaggaattcaaaaaatgaaatagcacaaaaagaagctagaatcatt
aaaaaagaagaaattttagatggtaaaattgaaaaaattgaaattaaaagtttagaatta
gaaaaaattaatgatgaacttgaagaaaaaaagaaagaaattgatgttttaaaagtaaaa
caagaagaagaacttacaagagttagtgaacttacaaaagcagatgcaagagagatttta
ttgcataaggtaagagaagaaatgacacatgatatggcagttactataagagaatttgaa
aataaacttaatgaagaaaaagaaaaaattggtcaaaaaattctttcaactgctattggg
aaggctgctgctgattatgtagctgatgcaactgtgtcagttattaatcttccaaatgat
gaaatgaaaggaagaataattggtagagaaggaagaaatataagaactattgaagcatta
acaggtgttgatgtaattatagatgataccccagaagctgttgtactttcttgttttgat
ggtgtaaaaagagaaattgcaagacttacaatagaaaaattaattactgatggtagaata
catccaggtaagatagaagaaattgtaaataaatgtaaaaaagatatagaaaaggaaata
gttgctgctggtgaggaagctcttatagaactttctatacctactatgcacccagaaatt
ataaagactttgggaagattaaaatacagaacaagttatggacaaaatgtattaactcac
tcaatagaagttgcaaaaattgcttcaacaatggctgctgaaattggagctaatgttgaa
cttgcaaaaagaggagggttacttcatgacataggtaaggtacttgtcaatgaaattgaa
acttctcacgctattgttggtggggaatttataaaaagatttggtgaaaaacaagatgtt
ataaatgctgtaatggctcaccataatgaagttgaatttgaaacagttgaggctatactt
gttcaagctgctgatgctgtatctgcttcaagacctggtgctagaagagagactttaact
gcctatatcaagaggttagaaaatcttgaagaaatagcaaattcatttgaaggtgtggaa
tcttcttatgctattcaagcaggtagagaattaagaatagtaattaatccagataaagtt
agtgatgatgaagcaatattgatgtcaagagaggttgctaaaaaaatagaagatactatg
caatatccaggacaaataaaagttactattttaagagaaacaagagcagtggactatgca
aaataa
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