KEGG   Flavobacterium nackdongense: E1750_04595
Entry
E1750_04595       CDS       T06713                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fnk  Flavobacterium nackdongense
Pathway
fnk02024  Quorum sensing
fnk03060  Protein export
fnk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fnk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    E1750_04595
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E1750_04595
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E1750_04595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fnk02044]
    E1750_04595
Enzymes [BR:fnk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     E1750_04595
Secretion system [BR:fnk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   E1750_04595
  Eukaryotic Sec-SRP protein
   E1750_04595
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin nSTAND3 KAP_NTPase cobW AAA_22 CLP1_P CbiA 6PF2K APS_kinase AAA_33 AAA_31 KTI12 TsaE NACHT NPHP3_N DO-GTPase1 AAA_18 RRM_Nup35 ATP_bind_1 AAA_16 AAA_17 AAA_14 ArsA_ATPase ResIII
Other DBs
NCBI-ProteinID: QBN18112
UniProt: A0A4V1AGI0
LinkDB
Position
complement(1160089..1161444)
AA seq 451 aa
MFDNLSDKLDKAFHILKGHGKITEVNVAETLKEVRRALLDADVNFKIAKDFTTKVKEKAI
GQNVLTTLQPGQLLVKLVKDELTELMGGDVAGINLSGNPTVILMSGLQGSGKTTFSGKLA
NYLKTKKNKKPLLVACDIYRPAAIKQLHVVGEAIGVDVYSEPDNTNPVIIAQNAISFAKH
QGLNVVIIDTAGRLAVDEAMMTEISNVHKAIQPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAAISIKTVVNKPIKFVGTGEKMDAIDVFYPERMAERILGMGDVV
SLVEKAQEHYDEEEARKIQKKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGASKAMK
DVQIEDDAFKHIEAIIHSMTPKERSKPAIIDVKRKARIAKGSGTKVEQVNQLMKQFEQMS
KMMKMMQGPGGKNMMKMMGNMKGMPGMPGMR
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttcgataatttaagcgataaattagacaaagcctttcacatccttaaaggtcacgga
aaaataaccgaagtaaacgttgccgaaaccctaaaagaagtgcgtcgtgcattattagat
gccgatgttaactttaaaattgccaaagattttaccactaaagtaaaagaaaaagcgatt
ggtcaaaacgtgttgactacacttcaaccgggacaattattagtgaaattagttaaagat
gagctaaccgaattgatggggggtgatgtggctggaatcaatctttctggaaatccaact
gttattttgatgtcaggtttgcaaggttctggtaaaactactttttctggtaaattagcc
aattatcttaaaaccaagaaaaacaaaaagccacttttggtagcttgtgatatttatcgt
cctgcggccatcaaacaattgcatgtagttggagaggcaataggagtcgatgtttattca
gagccagacaataccaatcctgtgataattgcccaaaacgcgattagttttgcaaagcat
caaggtttgaatgtcgtaattatagatactgccggtcgtttggctgtagatgaggcaatg
atgaccgaaatttctaatgttcacaaagccattcaaccgcaagaaaccttgtttgtagtc
gattcgatgacggggcaagatgctgtaaatacagctaaagccttcaatgatattttgaat
tttgatggtgttattttaaccaaattagatggtgatactcgaggtggtgctgctatttcg
attaaaacggtagtcaataagcctatcaaatttgtaggaactggcgaaaaaatggatgct
atcgatgtgttctatccagaacgtatggccgagagaatcctcggaatgggagatgtggtg
tctttggtagaaaaagctcaagaacattacgacgaggaagaagctagaaaaattcaaaag
aaaatcgccaaaaatgaatttggtttcgatgattttctttcccaaattcagcaagtgaag
aaaatggggaatatgaaagacttagtagggatgattcccggagcgtcaaaagcgatgaaa
gatgtgcaaatagaagacgatgctttcaagcatattgaagccataatacattcgatgaca
ccaaaagaaagatcgaaaccagccataattgatgtgaagagaaaagcgagaattgctaaa
ggttcaggtacgaaagtcgaacaagtgaatcagttgatgaaacaattcgaacaaatgagc
aaaatgatgaagatgatgcaaggacctggcggaaaaaatatgatgaaaatgatgggaaat
atgaaaggaatgcccggaatgcctggaatgagataa

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