Fervidobacterium nodosum: Fnod_1293
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Entry
Fnod_1293 CDS
T00579
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fno
Fervidobacterium nodosum
Pathway
fno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fnod_1293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fno03019
]
Fnod_1293
Messenger RNA biogenesis [BR:
fno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Fnod_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
LRIM1_dimer
KH_NusA_2nd
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
ABS61140
UniProt:
A7HMK7
LinkDB
All DBs
Position
1394510..1396063
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AA seq
517 aa
AA seq
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MEWLIYIVILFVGIAAGAFFGISVGRKRAEEALEKKLKAAKEDAESIIKSAEKEASEIKK
KAIIEAREEAHQIREEIEKERKKREEEIKQLEERLLKREEMLSKREELIDKRENYVENLK
IELESKAKEIEEKAKEIERRFIELAGITHEQAREIVLQEAREKYEHEIAKFFVQIKTRYE
DEADKYAKKIIADAIQRYAPEYIGEVTISTVALPNDDMKGRLIGREGRNIRTFEKITGVD
LIIDDTPEMVTLSSFNPLRREVARRTIEKLVQDGRIHPARIEEMYEKAKAEVEREIKEAG
QDAVITVGVGGLHPEIIKLLGRLKFRTSYGQNVLAHSVEVAQIAGLLAAELGLNVDKAKR
GGLLHDIGKAIDHEVEGSHTDIGAEMLKRYGESDEIINMVMAHHGQEEPITPEAAIVAAA
DAISAARPGARREDVENYIKRLMKLEEIAKSYKYVENAYAIQAGREIRVIVQPDKTDDAT
IEKLAHDIATRIENELQYPGVLKVVVIREKRSVSYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaatggttgatatatatagttatattatttgttggaatagcggcaggtgcgtttttt
ggcatttcggttggaagaaaaagagcggaagaagctttggagaaaaagctcaaagcagct
aaagaagatgctgaaagcataattaaaagtgcagaaaaagaagcaagtgaaataaagaaa
aaggctataatcgaagcgcgtgaggaagctcatcaaattcgcgaagaaatagaaaaagaa
agaaaaaagcgagaagaagagataaagcaactcgaagaaagattgcttaaacgtgaagaa
atgctgagtaaacgcgaagagcttatcgataaaagggaaaattatgtggaaaatttaaaa
atagagctcgaatctaaagccaaagagatagaagaaaaggcaaaggaaatcgagaggaga
tttatagagctcgctggtattacacatgaacaagcaagagaaatagtacttcaagaggcg
agagaaaagtacgaacatgaaattgctaaattctttgtccagataaagacaagatacgag
gatgaagccgataagtacgctaaaaaaatcattgctgatgctattcaaagatatgcacca
gaatacataggtgaagtaacgattagcactgttgctttgccaaatgacgacatgaaaggt
agattgataggtagggaaggtagaaacataaggacatttgaaaagataacaggtgtggac
cttataatagatgacacaccagaaatggttactttaagctcgtttaatccattaagaaga
gaagttgcgagaagaactatcgaaaaactagttcaagatggtagaatacacccagcaagg
atagaagagatgtacgaaaaagctaaggcagaagttgaaagagaaataaaagaagcagga
caagacgcggttataacagttggtgttggaggtttacatccagagattatcaaattgctt
ggtagattgaaattcagaacaagctacggtcaaaatgtgctagcacattcggtggaagtt
gcacaaatcgcaggtttgcttgcagccgaattaggtttgaatgtagacaaagccaaaaga
ggaggcttactccacgatataggtaaggcgatagatcacgaagtcgaaggttcacacacc
gatataggtgctgaaatgttgaaaagatatggtgagtctgatgagataattaatatggtt
atggcacaccatggtcaagaagaaccaataacaccagaagcggctatagtagctgctgcg
gatgcaatttcagcagcgagacctggggcaaggcgtgaagacgtcgaaaattacatcaaa
cgtttgatgaaacttgaagaaattgcaaagagttacaaatatgttgaaaatgcgtacgca
atacaagctggtagggaaataagagttatagtccaaccagataaaacggacgatgcgaca
atagagaaacttgcgcacgatatagcaacaagaatagaaaacgaactacaatatcccggt
gtattgaaagttgtagttataagagaaaaaagatcggtttcttacgctaagtga
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