Fusobacterium nucleatum subsp. nucleatum ATCC 25586: FN1913
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Entry
FN1913 CDS
T00077
Name
(GenBank) hydrolase (HD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fnu
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Pathway
fnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FN1913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fnu03019
]
FN1913
Messenger RNA biogenesis [BR:
fnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FN1913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH-I_KHDC4-BBP
Phage_scaffold
Motif
Other DBs
NCBI-ProteinID:
AAL94012
UniProt:
Q8RHT2
A0ABN5J5E9
LinkDB
All DBs
Position
complement(410144..411670)
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AA seq
508 aa
AA seq
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MALIFAVFFKKIVIDRQIEKLNDLEDEVEKAKLKAKEIVEEAERDAVSKAKEIELKAKEK
AYQIKEEIEKEARNSKNEIAQKEARIIKKEEILDGKIEKIEIKSLELEKINDELEEKRKE
IDDLRVKQEEELSRVSELTKADAREILLRKVREEMTHDMAITIREFENKLDEEKEKISQK
ILSTAIGKAAADYVADATVSVINLPNDEMKGRIIGREGRNIRTIEALTGVDVIIDDTPEA
VVLSCFDGVKREVARLTIEKLITDGRIHPGKIEEIVNKCKKDIEKEIVAAGEEALIELSI
PTMHPEIIKTLGRLKYRTSYGQNVLTHSIEVAKIASTMAAEIGANVELAKRGGLLHDIGK
VLVNEIETSHAIVGGEFIKKFGEKQDVINAVMAHHNEVEFETVEAILVQAADAVSASRPG
ARRETLTAYIKRLENLEEIANSFEGVESSYAIQAGRELRIVINPDKVSDDEATLMSREVA
KKIEDTMQYPGQIKVTILRETRAVEYAK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttggcactaatctttgcagtcttcttcaaaaagatagtcattgatagacaaattgaaaag
ctgaatgatttagaagatgaagttgaaaaggctaaactgaaagctaaagaaatagttgaa
gaagctgaaagagatgctgtttcaaaagctaaagaaatagaattaaaagctaaagaaaaa
gcataccaaataaaagaagagatagagaaagaagctagaaattcaaaaaatgaaatagct
caaaaagaagctagaatcattaaaaaagaggaaattttagatggtaaaattgaaaagatt
gaaattaaaagtttagagttagaaaaaattaatgacgaacttgaagaaaaaagaaaagaa
attgatgatttgagagtaaaacaagaagaagaactttcaagagttagtgaacttacaaag
gcagatgctagagagatcctgttacgtaaagtaagagaagaaatgactcatgatatggct
attactataagagaatttgaaaataaacttgatgaagaaaaagaaaaaataagtcaaaaa
atcctttcaactgctataggaaaagctgctgctgattatgtggctgatgcaacagtatca
gttattaatttaccaaatgatgaaatgaaaggaagaataattggtagagaaggtagaaat
ataagaactattgaagccttaacaggtgttgatgtaattatagatgataccccagaagct
gttgtactttcttgttttgatggagtaaaaagagaagttgcaagacttacaatagaaaaa
ttgattactgatggtagaatacatccaggtaagatagaagaaattgtaaataaatgtaaa
aaggatatagaaaaggaaatagttgctgctggtgaagaagctcttatagaactttctata
cctacaatgcacccagaaattataaaaactttgggaagattgaaatatagaacaagctat
ggacaaaatgtgttgactcactcaatagaagttgcaaaaattgcttcaacaatggctgct
gaaattggtgctaatgttgaacttgcaaaaaggggaggtttacttcatgatataggtaag
gttcttgtcaatgaaattgaaacttctcatgctattgttggtggagaatttatcaaaaaa
tttggtgaaaaacaagatgttataaatgctgtaatggctcaccataatgaagtagaattt
gaaactgttgaagctatacttgttcaggctgctgatgctgtatctgcttcaagacctggt
gctagaagagaaactttaacagcttatattaagagattagaaaatcttgaagaaatagca
aattcatttgaaggtgtagaatcttcttatgctatccaagcaggtagagaactaagaata
gtaattaatccagataaagttagtgatgatgaagcgacattgatgtcaagagaggttgct
aaaaagatagaagatactatgcaatatccaggacaaataaaagttactattttaagagaa
acaagagcagtagaatatgcaaaataa
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