Frankliniella occidentalis (western flower thrips): 113206668
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Entry
113206668 CDS
T07591
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
foc04040
]
113206668
Ion channels [BR:
foc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113206668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
113206668
NCBI-ProteinID:
XP_052129603
UniProt:
A0A9C6X5W7
LinkDB
All DBs
Position
Unknown
AA seq
2094 aa
AA seq
DB search
MSECSESVSEEERSLFRPFTRESLSAIETRIAEQEARHRELERKRAEGEDEYMGRKKSKK
EVRYEDSDEDEGPQPDATLEQGVPIPVRMHGNFPAELASTPLEDIDPFYHNQRTFVVISK
GKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPSSPKVES
TEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVIVLAYITMGIDLGNLAALR
TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQK
CIRNFPNDGSAGPLTDANWFAHASNKTNWECNDEDARDCPLCGNSSGAGMCEPGYTCIQG
FGSNPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFY
LVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKETRRVNRVAAHEAKVHAAA
EAAAAAEAATHEADTAGSVAKSPSAFSCQSYELFVGQEKGNIDDNNREKMSIRSDDCAES
LSEHHTRAGQTKSRKMSADSLTEASLSLPGSPFNIRRASRSSHQFAMRNPPRAGRWGGDR
KPLVLNTYLDAQEHLPYADDSNAVTPMSEENGAIVVPVYYTNLGHSSRHSSYTSHASRLS
YTSHGDLLGALGGPMAKQPTKESRLRSRSSRASQASQQSHVITQQPTYREYEPSADLGEE
QRSKLQDNPFIDSGHVQNIVNMKDVMALNDIIEQSQGRQSRQSEQAVSVYYFQQTEEDEE
EPTFKEKLIAASLRGIDVFCVWDCCWCWLKLQHYVSQLVFDPFVELFITLCIVVNTLFMA
LDHHDMDPAMDSALKSGNYFFTATFGIEATLKLVAMSPKFYFQEGWNIFDFIIVALSLLE
LGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLVFVLCIIIFIFAV
MGMQLFGKNYYDNVDKFPGGEMPRWNFINFMHSFMIVFRVLCGEWIESMWDCMLVGDWSC
IPFFLATVVIGNLVVLNLFLALLLSNFGSSNLFAPTADSETNKIAEAFNRISRFINWIKM
NVANVLKMVRNKLTNQISDQTAHSNRDLDLDLGADEILADGGLVFRDKKSPNTQLEMAIG
DGMEFTIHGDLKNKLRKGKFLNNAKSIGNSITGNHQDNRFESDFIKHRYDDDNISNHSYG
SHKNRPFKDESHKGSLETLDGEEKKDASKEDLEGERVETDLEGDVEGEGEGDMDEIIIAD
NTEDVLVGEYPADCCPDNCYKRFPFLAGDDDAPFWQGWANLRLKTYQLIENKYFETAVIT
MILLSSMALALEDVHLQSRPILQDILYYMDRIFTVIFFIEMLIKWLALGFRKYFTNAWCW
LDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPS
IFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSHEIIPDKNACIAENYTWENSP
MNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREINKQPIRETNIYMYLYFVFFIIFGSF
FTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRWRPQ
AIVFEICTDKKFDMFIMLFIGLNMLTMTLDHYQQAETFSTVLDHLNMIFIVIFSSECLMK
IFALRYHYFVEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVK
GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMNVKDKSGLDDVYNFKTFG
QSMILLFQMSTSAGWDGVLDGIINEEECVKPNNEMGIPGNCGSSTIGITFLLSYLVISFL
IVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQNFDPDGTQYIRYDQLSDFLDVL
EPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETGELAEVQPG
RPDEAGYEPVSSTLWRQREEYCARLIQHAWRKHKLHRGGGVSSDEGGPNAGDDAGSGGGG
GSAGSAGEDGDDESAGGGRQTAVLVESDGFVTKNGHRVVIHSRSPSVSSRLADV
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtgctcggagtcggtctcggaggaggagcgcagcttgttccggcccttcacc
agagagtcactatcagccatcgagacgcggatcgcggagcaggaggctcgccatcgggag
ctggagcggaagcgcgcggagggggaggatgagtatatgggacggaagaaatcgaaaaaa
gaagtgcggtacgaggactcggacgaggacgagggtccgcagccggatgcaacgctggag
cagggcgtgcccatacctgtgaggatgcacggcaacttccccgccgagctggcctccacg
cccctggaggacatcgaccccttctaccacaaccagcggacatttgtggtgatcagcaaa
gggaaggacatctttcgcttttcggcaacggacgcgctatggattctggacccgttcaac
cccatccgccgggtggcaatctacatcctcgtccacccgctcttttctctcttcatcatc
accactatcctcaccaactgtatcctcatgataatgcccagctcaccaaaagtcgagtca
acagaagtaatatttaccggcatctacacatttgaatcagccgtaaaggtgatggccaga
ggattcatcctacagccgttcacctaccttagagatgcatggaactggttggacttcatt
gtcatagttttagcttatatcacaatgggaatcgacttgggaaatctggcagccttaagg
actttccgagtgcttcgagctctcaagacggtcgccattgtacctggtctgaaaaccatc
gtgggtgctgtgatagaatccgtgaaaaatctgcgggatgtgatcattttgaccatgttc
tctctttctgtatttgcgcttatgggcctgcaaatctacatgggtgtgctcacacaaaaa
tgtattagaaattttcccaatgatgggtctgcaggcccactaaccgacgcgaactggttt
gctcatgctagtaacaaaacaaattgggagtgtaacgacgaggacgcccgcgactgcccg
ctgtgcgggaactcatcgggcgccgggatgtgcgagccgggctacacgtgcatccagggg
tttggctccaaccccaactatggctacaccagcttcgacacgttcggctgggcgctgctc
tccgccttcaggctcatgacgcaagactactgggagaacctctaccagctggtactgcgc
tcagccgggccctggcacatgctcttctttatcgtcatcattttcctcgggtcgttctat
ctggtgaacttgatcctcgctatcgtcgccatgtcgtacgacgagctccagaagaaggca
gaggaggaagaggccgccgaagaggaggctataagagaggccgaggaggccgccgcagcc
aaggagacgagacgggtgaatcgcgtcgccgcacacgaggccaaggtgcacgccgcggct
gaggcggcggcggcggcggaagctgcgactcacgaggcagacactgcgggcagcgtcgcc
aagtcgccgtcagcgttttcgtgtcaaagctacgaactgttcgtgggccaggagaagggc
aacattgacgacaacaacagggagaagatgagcatccggtcggacgactgcgccgagtcg
ctgagcgaacaccacacccgcgcgggccagacaaagtcgcggaagatgagtgcagatagc
ctcacggaggccagtttgagtcttcctgggtcaccgttcaacatccggagggcttccaga
agttcacaccagtttgccatgaggaacccgccccgcgccggtcgctggggtggagaccga
aagcctctggtgctcaacacttacctggatgctcaggaacacctcccttacgccgacgac
tcgaacgccgtcacgcccatgtcggaggaaaacggcgccatcgtggtgcctgtctactac
accaacctgggccactcgtcgcgccactcgtcctacacgtcgcacgcctcgcgactgtcg
tacacgtcccacggcgacctgctgggcgcgctcggcggccccatggccaagcagcccacc
aaggagagccggctgcgctcgcgctcgtcgcgggcgtcgcaggcctcgcagcagtcgcac
gtcatcacgcagcagcctacctaccgagaatatgagccgtccgcagacctgggtgaggag
cagcgctccaaacttcaggacaaccccttcatagactcgggacacgtccaaaacatagtc
aacatgaaagacgtgatggcgctgaatgacattatagaacaatctcagggtcgacagtca
cggcaaagtgaacaagcagtgtctgtctattattttcaacaaacagaagaagacgaggag
gagcctactttcaaggagaagctgatagctgcctccttgcggggcatcgacgtgttctgc
gtgtgggactgctgttggtgctggcttaagctccagcactacgtcagccaacttgtcttc
gacccctttgtggagctttttatcacactctgcatcgtggtcaacacgctcttcatggcc
ctcgatcaccatgacatggatccagctatggacagcgcgttgaaaagcggcaattacttt
ttcactgctactttcggtatcgaagcgacactgaaacttgttgccatgagcccaaagttc
tactttcaagagggctggaacatcttcgacttcatcatcgtagcgctgtctctgcttgag
ctcggtcttgagggggtgcagggcttgtcggtgttgcggtccttccgtttgctccgagtg
ttcaagcttgccaagtcgtggcccacgctcaacttgctcatatctatcatgggtcggacc
atgggcgccttaggtaacttggtctttgtattgtgtatcattatcttcatcttcgccgtg
atgggaatgcagctcttcggcaaaaactactacgataatgtggacaaattccctgggggc
gagatgccgcggtggaacttcattaacttcatgcactcgtttatgattgtcttccgagtc
ctttgtggagagtggatcgaatcaatgtgggactgtatgctcgttggagactggtcttgt
atccctttcttcctggccacagtagtgatcggcaacttggtcgtattaaaccttttcctt
gccttgctcctgtccaattttgggtcttccaatctcttcgcccccacggcggacagtgag
acaaataaaatcgctgaggcttttaaccggatatcaaggtttattaactggattaagatg
aatgtagcgaatgttttaaaaatggtcagaaacaaactaaccaaccaaatatcagaccaa
actgcacattcaaatcgagatctggacctggatcttggagccgacgaaatcctagcagat
ggaggtctggtattcagagacaagaaaagtcccaacactcagctcgagatggccattggc
gatggcatggagtttaccatacatggagacctgaaaaacaagctcaggaagggaaaattc
ctaaacaatgccaaatcaataggaaattcaatcactggaaaccaccaagacaatcgtttt
gaaagcgattttataaagcacagatacgacgatgacaatattagcaatcactcttatggg
agccacaaaaataggcctttcaaagatgagagccataaaggtagcctcgagactctagat
ggcgaggaaaagaaggacgccagcaaagaggacttggagggcgagagggtagagacagac
ttagaaggtgatgtggagggcgagggtgagggggacatggacgagatcatcatcgccgat
aacaccgaggatgtgttggtgggcgagtaccccgccgactgctgcccggacaactgctac
aagcggttccccttcctggccggcgatgacgacgcgcccttctggcagggctgggccaac
ctgcgactcaagacttaccagctgatcgaaaataaatacttcgagacggctgtcatcact
atgattttacttagcagtatggccctggcattggaagacgtccatttacagagtagacct
attttacaagacatactttattacatggacagaatatttaccgtcatcttctttatcgaa
atgttgataaagtggttggcgttagggtttcgaaagtacttcactaatgcctggtgttgg
ctcgatttcgtcattgttatggtctctctgataaacttcgttgcctccctggttggggct
ggtggcattcaagccttcaaaacaatgaggacactcagggctcttaggcctcttagggct
atgtctagaatgcagggaatgagggtggtagtaaatgccttggtccaggctattcctagt
atcttcaacgtgctgttggtgtgcctcatattttggcttatttttgccattatgggagtc
caactgttcgccggaaaatattttaagtgtgtggatgcaaacaagacgactctgagccat
gaaattataccagacaagaatgcctgcatagcagaaaattacacatgggaaaattcaccg
atgaattttgaccatgtcggcaaggcctatttatgtctcttccaagtagcaacattcaaa
ggatggattcaaattatgaatgatgccattgactccagagagatcaacaagcaaccaatt
agggagacaaatatctacatgtacctgtactttgtctttttcattattttcggctcattt
ttcactttaaacctgtttatcggagttatcatcgacaacttcaacgagcaaaagaaaaag
gctggaggatccttagagatgttcatgactgaagatcagaagaaatattacaatgcaatg
aaaaagatgggctcaaagaagcctatgaaggccattccaagaccaaggtggagacctcaa
gccatagtgttcgagatttgtacggataaaaaattcgacatgtttattatgttgttcatt
ggtctcaacatgttgaccatgacacttgaccattatcagcaggctgaaacatttagtacg
gtgctggaccaccttaacatgatattcattgtaatcttcagttctgaatgtcttatgaaa
atatttgctctacggtatcactacttcgtagagccatggaaccttttcgattttgtagta
gtaattctatcaatattaggtcttgtactgtccgatattattgagaaatattttgtctcg
cccacgttacttcgagtggtgcgagtagcgaaagtaggtcgagttttgaggttggttaag
ggagccaagggcatccgaacgctgctcttcgcgctggccatgtctctgccagcgctcttc
aacatctgcttgctcctcttcctcgtcatgttcatctttgccatcttcggcatgtcgttc
ttcatgaacgtgaaagacaagagcgggctcgatgacgtgtataacttcaagaccttcggc
cagtctatgatcctgctcttccagatgtcgacatcagcgggttgggacggtgtgctggat
ggcatcatcaacgaggaggagtgcgtgaagcctaacaacgagatgggcattccgggtaac
tgcggctcctccactatcggcatcacgttcctgctgtcgtacctcgtcatttcgttcctt
atcgttatcaacatgtacatcgctgtcatcctcgagaattattctcaggcgacagaggac
gtgcaagagggcctgactgacgatgactatgacatgtactacgagatatggcagaacttc
gaccccgacggcacgcagtacatccgctacgatcagctgtcagactttctggacgtgtta
gagccgcccttacagatacacaagcccaacaagtacaagatcgtgtctatggacattccc
atctgcaagggcgacctcatgttctgcgtcgatatcctcgacgccctcactaaagacttc
ttcgcccgcaagggcaatcccattgaagagacgggtgaattagccgaggtacagccgggc
cggccggacgaggcgggctacgagcccgtgtcctccacgctgtggcgtcagcgcgaggag
tactgcgcgcgcctcatccagcacgcctggcgcaagcacaagctgcaccgcggcggaggc
gtgtcctctgacgagggcggccccaacgccggcgacgacgctggcagcggcggtggcggc
ggcagcgctggcagcgccggcgaggacggcgacgacgagtcagcaggcggcggtcggcag
acggccgttctcgtcgagtcggacggcttcgtgacgaagaacggtcaccgcgtggtgatc
cactcgcggtcgcccagtgtgtcttcgcgccttgcggatgtctga
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