Frankliniella occidentalis (western flower thrips): 113213552
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Entry
113213552 CDS
T07591
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113213552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113213552
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113213552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_16
TPR_1
TPR_17
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_21
T7SS_EccA1_N
ARM_TT21_C
ARM_TT21
ARM_TT21_5th
TPR-S
ChAPs
DUF7017
SRP_TPR_like
ImpA_N
EST1_DNA_bind
BTAD
DUF7768
DMAP1
Motif
Other DBs
NCBI-GeneID:
113213552
NCBI-ProteinID:
XP_026288453
UniProt:
A0A6J1T565
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MDGKEIKRVLKEAKEAIKSKDTKTAIKLCKSVLKDDRDNYVALVLFGASLQESDQHEEAP
KAYKKASEVSPDQPLAWQGLVSYYEKHKKNIKSEFEGDVLRAYAYLLPQEIDGTKKHEMA
MKLSELAIKLQSSEECLSLLPKLQSDMLPVSEIRRCFLKALFQMKDLKETDSIVIQKALE
QVVLDWRENPKGNDYDIQEFYRQYLKHLYRSKDYEKLFKEAKLMAETFSKDPYPLEWICK
LWVEFVAEGKDIGFIKDTIEKYVNTLEIVCPAASSVSMAKGAMHFCRSELVKAREELNKA
LTSGQSPWHVYLLLADVELKFGLPQEALSLLSEAKMRVKQLSTNQEYVLKRCEAETLIGT
LQQENLNRAAQLCKELLSEKNTDVAVHLLYARACVQLKNFEEAQKQFIEIGTSKTCSAKV
TLLHAQILCLSGQSDKAAFVLESIASDAKDAEIWLALARLHGNSGKQNNVLTDLMEAARC
EPFYWETFMLLGNQYKKISTPASLDKARRCYQKALQLNPKSLQIAKHLSDVLLQLHDVES
NIQLLDMMTQTSNEKWIWLRLGLLHSECGEVEKAINFLCNAVRSDPSDCRIWESLGDAYM
LRGSWHAALKSFMKVKQLSPENIYAAYQIGTVKLRMEEFEDALIAFRQLIELSEDYVPGL
QGQGEAAFRWAQVLRQEQRIGCAKDRCQEAIDAFTKVLNKRQDLSCTWKLLGDTCLLGAK
LPPFYASFHVTAWIVCPSASSNRRETSLQRKMDMFLLAERMYCRAMSISQDSSLIWHDLA
STNFWHAMAVQKSNKRNELLQRAMTGARQAVTLNPKNAMHWNLLGVVAATEEIKKWAVAQ
HAFIQSILLDNSSPLAWTNLGTLYLMIGDIQLANKAFSAAQRVDHSYTRCWVGQAMIAET
MDHHETLDLFRHAASLEYHHESCSGYAHWVLTTLLNNEKLSKIDNGEEIMVIKDMKSMYA
LEVAADCMKWYTERHASNPCGWNMLGLLLERQRLFQSSQRAFQRGLEEAILQGSDSVPMN
AIRCNLGRILVNLKDYEKAVDILQQVTVPSFASQSGLALALYKAEKFEEAYGAYSSALEW
LAPDEETKALILMAMAAMQYSFGQLEDCKTLLFQSIQPRPLSAHPLLALCAIGLLNQDIT
MSKIMLKELGQFKDDPRYIAHIGLLASYTAFIQNDQTGALRALSKAIHRHPGEGGLWLAL
SQVQMHAHPNCDAAAIRRTAQAAIDLGRGNMDITKIQSIISVAHLLSNDVESASISSQKA
LHQYPNIAENWATFVASVLPKDKSSTQAAKLRDTISHVRRRLQPSAGGLKKWLGNCEHHL
ASLSSP
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggacggtaaagaaataaaacgcgttttaaaagaagcgaaggaggcgataaaaagtaaa
gacacgaagacagctattaagttatgcaagtcagtgttgaaggacgacagagacaactat
gtggccctggtactgtttggagcctcacttcaggaatctgatcagcatgaagaggctccc
aaggcatataaaaaagcaagtgaagtgtcaccagaccaaccgcttgcttggcaaggttta
gtatcttactatgaaaaacataaaaagaatataaaatcagaatttgaaggtgatgtctta
agagcttatgcctatctattacctcaggagattgacggtactaaaaagcatgagatggct
atgaaactctctgaacttgcaataaaattgcaatcttctgaagaatgcttgtccctcctt
cctaagctgcaaagtgacatgctaccagtaagcgagatacgaaggtgtttcttgaaagca
cttttccaaatgaaagatttgaaagagactgactcaattgtgattcagaaggcgttggaa
caagttgtcctagattggagagagaacccaaagggcaatgattatgacattcaagaattt
tatcgtcagtacctgaaacatctgtatcgaagtaaagattatgaaaagctcttcaaggaa
gcaaagttgatggctgaaacatttagtaaagatccataccctttggaatggatctgtaag
ctgtgggtagaatttgtagcagaggggaaagatattggtttcatcaaggatactattgag
aaatatgttaacaccttagagattgtttgtccagctgcaagttctgtcagtatggcaaag
ggagcaatgcatttttgtcgctctgaacttgtaaaagcacgagaagaacttaataaagcc
ttgacaagtgggcagtctccgtggcatgtgtacttgctgcttgctgatgttgagttgaag
tttggactgccgcaagaagctctttctcttttatcagaggctaaaatgagagtcaagcaa
ctatcaaccaaccaggagtatgtcttaaaaaggtgtgaggcggaaactctaattggaaca
cttcaacaagaaaatttaaatagagcagctcaactttgcaaagagcttttgtctgaaaaa
aatacagatgtagctgttcacttactttatgcaagagcctgtgtacaacttaagaatttt
gaagaggctcaaaaacaattcatagaaattgggacttcaaagacatgctcagctaaagta
acactgcttcatgctcaaatactttgtctttcagggcagagtgataaagctgcttttgtt
ttagagtcaattgcctctgatgcaaaagatgctgaaatttggttagctcttgcccgactg
catgggaactctggaaaacaaaacaatgtcttgacagatttgatggaggcagcacgttgt
gaaccattctactgggaaacatttatgctcttgggtaaccagtataaaaaaatatcgaca
ccggcttctttggacaaagcaagaagatgttatcagaaagcattgcagctcaacccaaaa
tctcttcaaattgctaagcatctcagcgatgtgttactgcaactacatgatgttgaaagt
aacattcaattattggatatgatgactcagacaagtaatgaaaagtggatttggctccgt
ttaggtcttttacattcagagtgtggagaggttgagaaagcaatcaacttcctttgtaat
gctgttcgcagtgatccctctgattgtcggatttgggaaagccttggtgatgcatacatg
ctgcggggatcttggcacgccgcattaaagtcttttatgaaagtgaagcagttgtcacca
gaaaatatatatgctgcatatcagataggaacagtaaaactgcgtatggaagaatttgag
gatgctctcattgccttcaggcaactcatagagctatctgaggattatgtgccaggcttg
cagggacaaggagaagctgcattccgctgggcacaagttttacggcaagaacagcgcatt
ggctgtgccaaggaccgctgtcaggaggctattgatgcttttacaaaagttctgaataaa
agacaggatttgtcatgcacttggaaattattaggtgacacttgtctgttaggagccaaa
ttaccgcctttttatgctagttttcatgttacggcatggattgtttgtcctagtgcaagc
tctaatagaagagagacttcattacaaaggaaaatggacatgtttctattagcagagagg
atgtactgccgagctatgtcaataagtcaggacagtagtctgatatggcacgatttagca
tcaacaaacttctggcatgcaatggctgttcagaagtctaataaacgaaatgaactttta
caacgagctatgacaggagcccgccaagcagtaacgctaaaccccaaaaatgccatgcac
tggaatcttcttggggtagttgctgcaacagaagaaattaagaaatgggctgtggcacaa
cacgcgtttattcagtcaattctcctcgataattctagtccattggcttggacaaattta
ggtacactctaccttatgataggagatatacaattagccaacaaagctttttcagctgca
cagagggtggaccatagctacacaagatgttgggtgggtcaggccatgattgcagagacg
atggaccaccatgaaactctagatttgtttagacatgctgcatctttggagtatcatcat
gaaagttgttctggttatgcacattgggttttaacaacacttttaaacaatgaaaaacta
tcaaaaattgataatggagaggagattatggtcattaaagacatgaaaagcatgtatgca
ttggaagtggctgctgattgtatgaagtggtacacagagcggcatgcctctaatccctgt
ggttggaatatgttagggctgttacttgagaggcaaagattgttccaaagttctcagagg
gcatttcaaagaggtcttgaagaagccatactccaaggttcagattcagtccccatgaat
gccatccgttgcaatttaggtcgaatactagttaatctgaaagattatgaaaaggctgtt
gatattttacaacaagttactgttcctagttttgcgtcccaatcaggactcgccctagct
ctttataaagctgaaaaatttgaggaggcctatggagcttatagctcagctctggagtgg
cttgcaccagatgaagaaacaaaagctctcattctcatggcaatggcagctatgcagtac
agtttcggtcagttggaagattgcaaaactttgttattccaaagcatacaaccaaggccc
ctctctgcccatcctcttcttgctctatgtgcaattggtctgctgaaccaagacatcacc
atgtcaaaaattatgctcaaagaactggggcagtttaaggatgacccaaggtacatagcg
cacattgggctccttgcatcatatactgcattcattcagaacgaccagacaggagcactg
cgagctctcagcaaagctatacatcgtcatccaggagaagggggattgtggctggctctc
tcgcaagttcagatgcatgctcatcccaattgtgatgctgcagcaattcgacgtacagcc
caagctgctattgatttgggaaggggcaacatggatataacaaagattcaatccataatt
agtgtggcacacttactctctaatgatgtggaatcagcttccataagctctcagaaagct
ctccatcagtatcctaacattgctgagaactgggcaacatttgttgcatcagtactacca
aaggataaaagttcaacgcaggctgcaaagctccgtgacaccataagccatgtccggcgc
cgacttcagccgtcagctggaggcctaaagaaatggcttgggaactgtgaacaccacctc
gccagtttatcttccccataa
DBGET
integrated database retrieval system
