Frankliniella occidentalis (western flower thrips): 113213985
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Entry
113213985 CDS
T07591
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein complementing XP-C cells homolog
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113213985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
foc03400
]
113213985
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113213985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
Transglut_core
BHD_2
Motif
Other DBs
NCBI-GeneID:
113213985
NCBI-ProteinID:
XP_026288998
UniProt:
A0A6J1T6W7
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Position
Unknown
AA seq
1315 aa
AA seq
DB search
MSKLQLRSTRSRRRATSPAAVEDSKADVPSSKRPRKVNSAKHSESDETKPDLSSKDSSLQ
ITSKVDLSESDSSSDEFIRPADTLKVNAGILSLRNGPSPEPDFSAIESTILTGVSRLSDS
DSDNSDFEEVGVDSAPNSSDTLVKKESPSFGKDTLKAANHNDLSKVSSSKSDKSVNGKLS
LEKIKSENNEKMSLTKSEPEGKKVLSEKNTKKVERVTRTSRKTSADKTMKTEFPESSKSV
SDKKQTTRQSSSKLKEDKKSRASASSKSSTTQKTKKEDKIRNSPIKKEVPESLDTMDIAQ
LLALGEGLKMDMKSPLPSDSESEDWEEVDQADQKKHEIPKEGVQITLDMPEFSWKRKKQR
DQQACMQAEMNRAFNRVRRELQLLCHKTSLLLWVAHGRYLNNVINNDGVQAIALSLVPTD
LTVLPKKPGRKYVDLLLKWFAKDFECSEGFPETLESSQSRPLGAILAQHFSRKYAKSTRE
LIFMFIAILRAVGMECRLIVSFNKTTTTLIFMFIAILRAVGMECRLIVSFQPMPLKPQSN
ELLAISTNGKRGKPSKKKNEEDDEVSEKQSSPQTPGTSKTAHSTIKCKSAPNNDGKSSKY
FRKSAPASSESISQNNDGPKKESSNKRKSESSAARSPVKTRGLRRKASEKKYKEKTDSES
ESDPDDPGPILSPGKKQKLDQDSSQRLKEAAAKRVPPSKRSISKKSVSPGPSQAAEKLSK
TSESESDFKVKRFSLAGTSKPSTSSKPSGSRRSISQESDSDSDFEKKPKSKQTSKTNKSP
ATKPSGSRRSRSQESDSDSDFEEKSKSKQTSKTNKSPAKKQPSRGRPSKGSGKKVLSSDD
NSENRKSMNSGSDYWVEVYLNDEDRWTCVDVPSKKIDSTKQILLKASQPVCYVIAFNADG
TLKDVTKRYSPKYSQVTVKQRVSVEWWDKTLKPFRPKHSRQEAAEDSEMNLVELDRPMPK
TVGECKNHPLYVLKRHLLKFEAIYPADSPSLGFVRGEPVYARQNVYTLHSREIWMKDAKV
VRLGQQPYKIVKARPKWDRLSGKVITDLPLEVFGPWQVEDYVPPPAKDGKVPRNAYGNVE
LFKPTMLPKGTVHLQVPFLSRVAKKLRIDCAPAVVGFDYHSGGCHPTYDGFVVCEEFVDV
LMDAWNKEIDESAKRREEKHEKRVYGNWRRLIKGLLIREHLKYRYDFKEEGAGEAGCSQS
LVNADALKASRIQAENAPLPPIFPKLMANIKNKKTQRRTSTTKANKNQTKSLGGKEGPKG
RKGKQGGGKKKKVETSEEEEESDWDTGTTSEDETEMVLLSDEDSGSEFEDLKNKK
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacttcagcttagaagcaccaggagtagaaggagggcaacgtccccagctgct
gtagaggactcgaaggcagatgttccctccagcaaaagacctcggaaggttaacagcgct
aaacattcagagtcggatgaaactaaaccagatctctcatcaaaagacagcagccttcaa
atcactagcaaagtggatctttcagagtcggacagcagttctgatgagtttattaggcct
gcagacactttgaaagttaatgctggtatactctctctcaggaatggaccgtcacctgaa
ccagatttctcagctatagaaagtactattttgacaggagtgtcaaggctaagtgattct
gattcagataactctgactttgaagaagttggggttgattcagcacccaattcctctgac
actttagtcaagaaagaaagcccaagctttggaaaggataccctaaaagcagcaaatcat
aatgatctatcaaaagttagttcttctaaatctgataaatctgtcaatggaaagctttct
ctggaaaagatcaagtcagaaaacaacgaaaaaatgtctctgacaaaaagtgaacctgag
ggaaaaaaagtattgtctgagaaaaataccaagaaagtagagagagtcactagaacctct
aggaagacaagtgccgataaaacaatgaagactgaatttcctgaaagtagtaagtctgtc
tctgacaaaaaacaaaccactcggcagtcttcaagcaagttaaaagaggataaaaagagc
agggcaagtgcttcatccaagagctctacaacacagaagactaagaaagaggacaaaatt
agaaattctcccatcaagaaggaggtgccggaatccctggacactatggacatagctcag
ctgcttgcccttggagagggtttaaagatggatatgaagtctccccttccatctgattct
gagagtgaagattgggaagaagtcgaccaagccgaccaaaagaagcatgaaattcctaaa
gagggtgttcaaattacattggacatgcctgagttcagttggaaacgtaagaagcagcgt
gatcaacaggcttgcatgcaagcagaaatgaaccgagcatttaaccgggtccgcagggag
ctgcagttactgtgccataagacaagtctgctgctgtgggtagcacatgggaggtacctc
aataatgtcatcaataatgatggtgtccaagcaattgcactctctcttgtgcccactgac
ttaactgtccttcccaagaaaccaggacgaaagtatgttgatctgctcttaaaatggttt
gcaaaagactttgagtgctcagagggcttccctgaaactcttgaaagtagtcagtcacgc
ccattgggggcaattcttgcacagcacttctctcgtaaatatgctaaatcaaccagagaa
ttgatatttatgtttattgcaatcctacgtgcagttgggatggaatgcagactcattgtc
tcattcaacaaaacaacaacaacattgatatttatgtttattgcaatcctacgtgcagtt
gggatggaatgcagactcattgtctcattccaacccatgcccttgaaaccgcaaagtaat
gaacttcttgcaatcagtaccaatggtaaaagagggaagccatctaagaaaaaaaatgaa
gaggacgatgaagtatcagaaaaacagtcgtcacctcaaacaccagggactagtaaaaca
gcacattcaaccattaagtgcaagtcagctcctaataatgatggtaaaagctcaaaatat
tttagaaaatctgcaccagcttcatctgaatccatctcacagaataatgatggtcccaag
aaagaaagcagtaacaaacgcaagtctgagtcctctgcagcaagatcacctgtcaaaact
cggggtcttagaagaaaagcgtcagagaaaaaatacaaagagaaaactgattctgaaagt
gaaagtgaccctgatgatccaggaccaattcttagccctggtaaaaagcaaaaacttgat
caagattcatcacaacgtttgaaggaagctgctgctaaacgtgtacccccaagtaagagg
tctatttctaagaagtctgtcagtcctggaccctctcaggctgcggaaaagttatccaag
acttcagagagtgaatcagattttaaagttaagaggttttctttggctggtacaagcaaa
ccatcaacctcttcaaaaccgagtggttcccgcaggtcaatatctcaagagtctgacagt
gacagtgattttgaaaaaaagcccaagtccaaacaaacttctaaaactaacaaatcacca
gctacaaaaccaagtggttcccgtaggtcaagatctcaagagtctgacagtgacagtgat
tttgaagaaaagtccaagtccaaacaaacttctaaaactaacaaatcaccagctaaaaag
cagccatccaggggaaggccatcaaaaggatcgggaaagaaagttctatcctcagatgat
aactcagaaaatcgtaagtcaatgaattcaggatctgattactgggtggaagtctatcta
aatgatgaagatcgatggacttgtgttgacgtcccgtccaaaaaaattgattccacaaag
caaatactgttgaaggccagtcaaccagtatgctatgtaattgcatttaatgctgatggt
acattgaaagatgtcactaaacgttattcccctaaatattctcaagtgactgtaaagcaa
agagtgtcagttgagtggtgggacaaaactttgaagcctttcagacccaaacattctcgt
caggaagcagcagaagatagtgaaatgaatcttgtagaactggatagaccaatgccaaaa
acagttggagagtgcaagaaccatccactttatgttttaaaacgccatctcctcaaattt
gaggcgatttaccctgcagactctccaagtctaggttttgtccgtggtgaacctgtttat
gccaggcagaatgtgtacactttgcattctcgagagatttggatgaaagatgctaaagtg
gtccgtcttgggcaacagccctataaaatagtaaaagctcggccgaaatgggataggctc
tctgggaaagtgatcactgatttacctcttgaagtgtttggtccatggcaagttgaagat
tatgtccctcccccagcaaaagatggaaaagttcccaggaatgcttatggaaatgtagag
ctgttcaaaccaactatgctgcccaaaggaactgtacatttgcaagttcccttcctgagc
agagttgcgaagaaacttcgcattgattgtgctcctgcagttgttggcttcgattatcat
tcaggtggttgccacccgacctatgatggttttgttgtatgtgaagagtttgttgatgtg
ctgatggatgcgtggaataaggaaattgatgaatctgccaaacgccgtgaagaaaaacat
gaaaagcgagtatatggcaattggaggagactgatcaaaggtttattgattagagaacat
ctaaagtaccgttatgatttcaaagaggagggagcaggggaggctggatgtagccagtcc
cttgttaatgctgatgcattaaaagcatctcgtattcaggctgagaacgcaccacttccc
cccatctttcccaaattgatggcaaatatcaaaaataagaagactcaaagaagaacttca
actaccaaggccaataagaaccaaacgaaatccttggggggaaaggagggaccaaaggga
agaaagggaaagcagggtggggggaagaaaaagaaagttgaaaccagtgaagaagaagaa
gaaagtgattgggacactggaacaacgtctgaagatgaaacggaaatggttctcttgtct
gatgaagatagtggaagtgagtttgaggacttgaagaataaaaagtag
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