Flavobacterium oreochromis: JJC03_09445
Help
Entry
JJC03_09445 CDS
T08111
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
foe
Flavobacterium oreochromis
Pathway
foe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJC03_09445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
foe02000
]
JJC03_09445
Enzymes [BR:
foe01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JJC03_09445
Transporters [BR:
foe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JJC03_09445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_29
AAA_15
AAA
AAA_24
PPV_E1_C
AAA_16
MMR_HSR1
AAA_23
nSTAND3
APS_kinase
AAA_25
AAA_18
PRK
Ploopntkinase3
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYS85457
LinkDB
All DBs
Position
complement(1978177..1980006)
Genome browser
AA seq
609 aa
AA seq
DB search
MDSNLKKIIPYALRYKTNIIWNILFNILYALFSTLLMVSIMPTLEVLFKQNARVNKKPIY
TGISNIKDFLTDSFNYKLTEISDEYGKQDALLVVISIVIITALLKNLFNYLGSRQVTVLR
NGVLRDLRIKLYNKIINLPVSYYSDTRKGDVMARMLGDVGEVQNSFFQILELIVREPMTI
VFSIIAMLFISIKLTLFVFIFIPISGFIISRIGKTLKSKSQKAQQEQGIFISILDETLSG
LKVVKGFNAETLFIQKFNDSVNRVLKLSNSIANKNNLSSPMSEFFGIVTIATLLWYGGHL
VLIEKSLAGTAFIGYIALAYTILQPAKSISKASYQVKSGLAAAERVFSLLEQESSIVDQP
NALDKKDFNNSIKIENINFAYADDTVLKNFTIEVPKGKTIALVGQSGSGKSTIANLLTRF
YDVNDGKISIDGTDIKDISMHSLRSLMGIVTQDSILFHDSIRNNLLIGKPNATDEEIIEA
LKIANAYEFVKELPEGINTSIGDAGGKLSGGQKQRLSIARAVLKNPPIMILDEATSALDT
ESEKLVQIALENMMQNRTSIVIAHRLSTIQKADNIIVMQKGEIVEQGTHNELLSKDGTYA
KLVMMQSLE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaatttaaagaaaataattccatacgcattaagatataagacaaacattatt
tggaatatcttatttaatattctttacgctttgttcagtactcttttaatggtatctatt
atgcctacccttgaagtgctttttaaacaaaatgcaagagttaataaaaaacctatttac
acaggtatatctaatataaaagatttcttaactgattcttttaactacaaactaaccgaa
atttcagatgaatacggcaaacaagatgctttattagttgttataagcatcgtaattatt
actgctttattaaaaaatctttttaattacctaggctcaagacaagttacagtgttaaga
aacggtgtattaagagatctacgaattaaactctataataaaattattaatttacctgtt
tcttattattcagatactcgaaaaggagatgtaatggctcgtatgttaggcgatgtaggt
gaagttcaaaattcgttctttcaaattttagaacttatagttcgagagccaatgacaatt
gtattttcaattattgctatgttatttataagtataaagttaactttatttgtctttata
ttcatacctatttcaggttttattatttctagaattggcaaaacattaaaatctaaatca
caaaaagcacagcaagaacaaggtatatttatttccatattagatgaaacattatcagga
cttaaagttgtaaaaggatttaatgctgaaactcttttcatccaaaaatttaatgattct
gttaatcgcgtattaaaattatctaatagcattgctaataaaaataatttatcctctcct
atgagtgagttttttggtatcgtaacaatagctactctgctatggtatggagggcattta
gttttaattgagaaaagtcttgctggaactgcttttattggttacatcgccttagcttac
acaattcttcaacctgctaaatctatttcaaaagcttcttatcaagtaaaaagcggtttg
gctgctgcagaacgtgttttctccttattagaacaagaaagcagtatagtagatcaacct
aatgctttagacaaaaaggatttcaataactctataaaaattgaaaatataaattttgct
tatgctgatgatacagttttaaaaaatttcacgattgaagttccaaaaggcaaaacaatt
gcattagtaggtcaatctggatcaggaaagagtaccattgcaaacttacttactcgtttt
tatgacgtaaatgatggaaaaataagtatagatggaacagatataaaggatatatctatg
cattccttaagatctttaatgggaattgtaacccaagattctattttatttcatgactca
ataagaaacaatttattaatagggaaacctaatgctactgacgaagaaatcattgaagct
cttaaaattgccaatgcttatgagtttgtaaaagagttacctgaaggcattaacacaagt
attggtgatgcaggaggcaaattatctggtgggcaaaaacaacgtttgtctattgctaga
gcggttttaaaaaatcctccaatcatgatccttgatgaagctacttctgctcttgatact
gaaagtgaaaaactggtacaaattgcgcttgaaaacatgatgcaaaatagaacttctatc
gtaattgcgcatagactttctacaattcaaaaggcagacaatattattgtgatgcaaaaa
ggtgaaattgtagagcaaggtacccacaatgaattactttccaaagatggtacatatgct
aaacttgttatgatgcagagtttagaataa
DBGET
integrated database retrieval system
