Entry |
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Name |
(GenBank) excinuclease ABC subunit A
|
KO |
K03701 | excinuclease ABC subunit A |
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Organism |
for Formosa sp. Hel1_33_131
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:for00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FORMB_00820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:for03400]
FORMB_00820
DNA repair and recombination proteins [BR:for03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FORMB_00820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FORMB_00820
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
81616..84447
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AA seq |
943 aa
MSKFDEFIEVKGARVHNLKNIDVKIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARGS
DAYSYNTNEKMVSYNDDQIKDLILESFNGQRISILSPVIRSRKGHYRELFEQIAKQGFVK
VRTDGVIVDITKGMMLDRYKMHDIEIVIDRLKIDATAQSTSRLNESINTAMYHGENVLMV
IEEDTKEVRFFSRDLMCPTSGISYPNPEPNNFSFNSPKGACPDCSGIGTLYKVNETKIIP
DTSLSIKNGGLAPQGAQKESWMFRQLELIGRRFDFKLSDPISKIPKEALKIILYGGKDDF
SVDSKTLGVSRNYVINFEGIANFIESQYKNADSTSIQRWAKSYMDNIKCPTCEGSRLKKE
SLYFKINSQNIAELSEMDVVDLAEWFKELPNHLSKNQEIISKEIIKEISTRLQFLLDVGL
DYLSISRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSVGLHQRDNEKLIKSLIALR
DVGNSVIVVEHDKEMIEQADHVIDIGPKAGKHGGEIISQGTPKDILNSGTMTADYLSGVK
KIEVPKTRREGNGKFLELKGCTGNNLKNVSIKLPLAKMIGITGVSGSGKSTLINETLYPI
LNNYYFHGVMEPMPYKSIKGLEHLDKVIDINQSPIGRTPRSNPATYTGVFGEIRALFAKI
PEAMIRGYKLGRFSFNVVGGRCETCRGGGLRVIEMNFLPDVYVECESCQGKRFNRETLEI
RYKGKSISDVLNMTIDEGVDFFELIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTIYILDEPTTGLHFEDIRVLMGVLNKLVNKGNTVIIIEHNLDVIKTV
DYIIDIGPEGGKGGGEILVKGTPEVVIKNKTSHTAKFLKKELH |
NT seq |
2832 nt +upstreamnt +downstreamnt
atgagcaagtttgatgaatttatagaagtaaaaggtgccagagtacacaatttaaaaaat
attgatgtaaagattcctcgggatcaattggtagtgattacagggctttcaggaagtgga
aaatcttcgttggcatttgatacgatttatgcggaagggcaacgccgttatattgaaacc
ttttcagcctatgcacgtcagtttttagggagtttagaacggcctgatgttgataaaatt
gatgggctttcgccagtcattgcgattgaacaaaaaacaacgagtaaatcgccccgatcg
acggtaggaaccattaccgaaatttatgattttttaaggttactatttgcaagaggatcc
gatgcctacagttataataccaatgaaaaaatggtaagttataacgatgaccaaatcaaa
gacctgatattagaatcctttaacgggcaacgcatctccattttatcgcctgtcatacgt
tctcgaaaaggacattacagagagctgtttgaacagattgcaaaacaaggcttcgtgaaa
gtgagaactgatggtgtaattgtcgatattaccaaaggcatgatgctagaccgatataaa
atgcacgatattgaaattgtgatcgaccgtcttaaaattgacgcaacggcacagtccaca
agtcgactgaacgaaagcatcaatacagcaatgtatcatggcgaaaatgtgctgatggtc
attgaagaagacaccaaagaagtgcgttttttcagtcgagatttgatgtgtcccacatct
ggaatttcctatccaaacccagaaccaaacaacttttcattcaattctcccaaaggcgcg
tgcccagactgtagtggtattggaacgctttataaagtaaatgaaaccaaaatcattcct
gacacaagtctgtctataaaaaatggagggcttgcaccacaaggtgctcagaaagaatct
tggatgtttagacaattagagctcataggacgacgctttgatttcaagctttcggatccc
atttcaaaaatcccaaaggaagccttaaagattatcttatacggtggtaaagatgatttt
tcagtggatagtaaaaccttaggcgtttcacgtaattatgtgattaattttgaaggcatc
gctaattttatcgaaagccaatacaagaatgccgattctacgtccatccaacgttgggca
aaaagctatatggacaatattaaatgtccaacttgtgaaggctctcgacttaaaaaagaa
tcgttatacttcaaaattaactctcaaaatattgccgaactttctgaaatggatgtggta
gatttagccgaatggttcaaagaattaccaaatcatctttctaaaaatcaagaaatcatt
tcgaaagaaattattaaagaaatttcgacacgcttacaattcctcttggatgttggtttg
gattatttatcaatcagtagaagttcaaaatctctttctggtggagaagcccaacggatt
cgtttggctacacaaataggctcacaactggtgggggtcttgtatattttagatgaacca
agcgttggtttgcaccaacgagataatgaaaaactcatcaaatctttaattgctttaaga
gacgtagggaattcggtgattgtggtagaacacgataaagagatgatagaacaagcagat
catgtgattgatattggaccaaaagcgggaaaacatggcggggaaattatcagtcaagga
acgccaaaagacattctaaatagtggcactatgaccgcggattatttgagtggtgttaaa
aaaattgaagttccaaaaacccgtagagaaggaaatggaaagtttttagagctcaaagga
tgtacaggaaataacctgaaaaatgtgtccataaagttaccactcgccaaaatgattgga
ataacaggtgtttcaggaagtggtaaatcgaccttaataaatgaaaccctctaccctatt
ttaaataattattattttcatggagtgatggaaccgatgccttataaatctattaaaggc
ttggaacatttagacaaagtgatcgatatcaatcagtcacctattggacgaacgccacga
agtaatcctgctacttatacaggggtatttggagaaatcagggccttatttgctaaaatc
ccagaagccatgattcgcggttacaaattaggacgctttagttttaatgtggttggtgga
cgctgtgaaacatgtagaggtggtggtctgagagttattgaaatgaacttcttgccagat
gtttatgtcgaatgcgaatcctgtcaggggaaacgatttaatagagaaaccttagaaatt
aggtacaaaggaaaatcaatcagtgatgtcttgaatatgacgatcgatgaaggcgtggat
ttctttgagttgattccgaaaattcaccgaaaattaaaaaccattaaagatgttggtttg
ggctacattacgttaggacaacaaagtactacgctttctggtggggaggcacaacggatt
aaattggccacagaactgagcaagcgcgacactggaaataccatttatattttagacgaa
ccgacaacggggcttcatttcgaagacattcgcgtgttaatgggtgtgcttaataaattg
gtaaacaaaggcaatacggtgattattatcgaacacaatttagatgtgataaaaaccgtt
gattacatcatagacattggtcctgagggtggtaaaggcggtggcgagattcttgtaaag
ggaacgccagaagttgttataaaaaacaaaacgagtcatactgctaagtttttaaaaaaa
gaattacattag |