KEGG   Formosa sp. Hel1_33_131: FORMB_00820
Entry
FORMB_00820       CDS       T04465                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
for  Formosa sp. Hel1_33_131
Pathway
for03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:for00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FORMB_00820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:for03400]
    FORMB_00820
DNA repair and recombination proteins [BR:for03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FORMB_00820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FORMB_00820
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 AAA_16 RsgA_GTPase nSTAND3 nSTAND1 AAA_23 DnaJ_CXXCXGXG MeaB AAA_18 AAA_15 cobW Viral_helicase1 PRK
Other DBs
NCBI-ProteinID: AOR27145
UniProt: A0A1D7XUZ4
LinkDB
Position
81616..84447
AA seq 943 aa
MSKFDEFIEVKGARVHNLKNIDVKIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGSLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARGS
DAYSYNTNEKMVSYNDDQIKDLILESFNGQRISILSPVIRSRKGHYRELFEQIAKQGFVK
VRTDGVIVDITKGMMLDRYKMHDIEIVIDRLKIDATAQSTSRLNESINTAMYHGENVLMV
IEEDTKEVRFFSRDLMCPTSGISYPNPEPNNFSFNSPKGACPDCSGIGTLYKVNETKIIP
DTSLSIKNGGLAPQGAQKESWMFRQLELIGRRFDFKLSDPISKIPKEALKIILYGGKDDF
SVDSKTLGVSRNYVINFEGIANFIESQYKNADSTSIQRWAKSYMDNIKCPTCEGSRLKKE
SLYFKINSQNIAELSEMDVVDLAEWFKELPNHLSKNQEIISKEIIKEISTRLQFLLDVGL
DYLSISRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSVGLHQRDNEKLIKSLIALR
DVGNSVIVVEHDKEMIEQADHVIDIGPKAGKHGGEIISQGTPKDILNSGTMTADYLSGVK
KIEVPKTRREGNGKFLELKGCTGNNLKNVSIKLPLAKMIGITGVSGSGKSTLINETLYPI
LNNYYFHGVMEPMPYKSIKGLEHLDKVIDINQSPIGRTPRSNPATYTGVFGEIRALFAKI
PEAMIRGYKLGRFSFNVVGGRCETCRGGGLRVIEMNFLPDVYVECESCQGKRFNRETLEI
RYKGKSISDVLNMTIDEGVDFFELIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTIYILDEPTTGLHFEDIRVLMGVLNKLVNKGNTVIIIEHNLDVIKTV
DYIIDIGPEGGKGGGEILVKGTPEVVIKNKTSHTAKFLKKELH
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgagcaagtttgatgaatttatagaagtaaaaggtgccagagtacacaatttaaaaaat
attgatgtaaagattcctcgggatcaattggtagtgattacagggctttcaggaagtgga
aaatcttcgttggcatttgatacgatttatgcggaagggcaacgccgttatattgaaacc
ttttcagcctatgcacgtcagtttttagggagtttagaacggcctgatgttgataaaatt
gatgggctttcgccagtcattgcgattgaacaaaaaacaacgagtaaatcgccccgatcg
acggtaggaaccattaccgaaatttatgattttttaaggttactatttgcaagaggatcc
gatgcctacagttataataccaatgaaaaaatggtaagttataacgatgaccaaatcaaa
gacctgatattagaatcctttaacgggcaacgcatctccattttatcgcctgtcatacgt
tctcgaaaaggacattacagagagctgtttgaacagattgcaaaacaaggcttcgtgaaa
gtgagaactgatggtgtaattgtcgatattaccaaaggcatgatgctagaccgatataaa
atgcacgatattgaaattgtgatcgaccgtcttaaaattgacgcaacggcacagtccaca
agtcgactgaacgaaagcatcaatacagcaatgtatcatggcgaaaatgtgctgatggtc
attgaagaagacaccaaagaagtgcgttttttcagtcgagatttgatgtgtcccacatct
ggaatttcctatccaaacccagaaccaaacaacttttcattcaattctcccaaaggcgcg
tgcccagactgtagtggtattggaacgctttataaagtaaatgaaaccaaaatcattcct
gacacaagtctgtctataaaaaatggagggcttgcaccacaaggtgctcagaaagaatct
tggatgtttagacaattagagctcataggacgacgctttgatttcaagctttcggatccc
atttcaaaaatcccaaaggaagccttaaagattatcttatacggtggtaaagatgatttt
tcagtggatagtaaaaccttaggcgtttcacgtaattatgtgattaattttgaaggcatc
gctaattttatcgaaagccaatacaagaatgccgattctacgtccatccaacgttgggca
aaaagctatatggacaatattaaatgtccaacttgtgaaggctctcgacttaaaaaagaa
tcgttatacttcaaaattaactctcaaaatattgccgaactttctgaaatggatgtggta
gatttagccgaatggttcaaagaattaccaaatcatctttctaaaaatcaagaaatcatt
tcgaaagaaattattaaagaaatttcgacacgcttacaattcctcttggatgttggtttg
gattatttatcaatcagtagaagttcaaaatctctttctggtggagaagcccaacggatt
cgtttggctacacaaataggctcacaactggtgggggtcttgtatattttagatgaacca
agcgttggtttgcaccaacgagataatgaaaaactcatcaaatctttaattgctttaaga
gacgtagggaattcggtgattgtggtagaacacgataaagagatgatagaacaagcagat
catgtgattgatattggaccaaaagcgggaaaacatggcggggaaattatcagtcaagga
acgccaaaagacattctaaatagtggcactatgaccgcggattatttgagtggtgttaaa
aaaattgaagttccaaaaacccgtagagaaggaaatggaaagtttttagagctcaaagga
tgtacaggaaataacctgaaaaatgtgtccataaagttaccactcgccaaaatgattgga
ataacaggtgtttcaggaagtggtaaatcgaccttaataaatgaaaccctctaccctatt
ttaaataattattattttcatggagtgatggaaccgatgccttataaatctattaaaggc
ttggaacatttagacaaagtgatcgatatcaatcagtcacctattggacgaacgccacga
agtaatcctgctacttatacaggggtatttggagaaatcagggccttatttgctaaaatc
ccagaagccatgattcgcggttacaaattaggacgctttagttttaatgtggttggtgga
cgctgtgaaacatgtagaggtggtggtctgagagttattgaaatgaacttcttgccagat
gtttatgtcgaatgcgaatcctgtcaggggaaacgatttaatagagaaaccttagaaatt
aggtacaaaggaaaatcaatcagtgatgtcttgaatatgacgatcgatgaaggcgtggat
ttctttgagttgattccgaaaattcaccgaaaattaaaaaccattaaagatgttggtttg
ggctacattacgttaggacaacaaagtactacgctttctggtggggaggcacaacggatt
aaattggccacagaactgagcaagcgcgacactggaaataccatttatattttagacgaa
ccgacaacggggcttcatttcgaagacattcgcgtgttaatgggtgtgcttaataaattg
gtaaacaaaggcaatacggtgattattatcgaacacaatttagatgtgataaaaaccgtt
gattacatcatagacattggtcctgagggtggtaaaggcggtggcgagattcttgtaaag
ggaacgccagaagttgttataaaaaacaaaacgagtcatactgctaagtttttaaaaaaa
gaattacattag

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