KEGG   Fusarium oxysporum: FOXG_10343
Entry
FOXG_10343        CDS       T04882                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
fox  Fusarium oxysporum
Pathway
fox03040  Spliceosome
fox04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FOXG_10343
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    FOXG_10343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fox03041]
    FOXG_10343
   04121 Ubiquitin system [BR:fox04121]
    FOXG_10343
   03400 DNA repair and recombination proteins [BR:fox03400]
    FOXG_10343
Enzymes [BR:fox01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     FOXG_10343
Spliceosome [BR:fox03041]
 Complex B
  Other components
   Prp19 complex
    FOXG_10343
 Complex C
   Prp19-CDC5 complex
    FOXG_10343
Ubiquitin system [BR:fox04121]
 Ubiquitin ligases (E3)
  U-box type E3
   FOXG_10343
DNA repair and recombination proteins [BR:fox03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    FOXG_10343
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR5 WDR55 WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st eIF2A Beta-prop_TEP1_2nd Beta-prop_Aladin EIF3I B-prop_COPA_B_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_ACSF4 WD40_RFWD3 Beta-prop_CAF1B_HIR1 V_ATPase_I_N VID27 Tricorn_2nd zf-Nse PEP5_VPS11_N NBCH_WD40 WD40_CFAP43 U-box Beta-prop_SCAP VPS9
Other DBs
NCBI-GeneID: 28951826
NCBI-ProteinID: XP_018247961
UniProt: A0A0J9VG94
LinkDB
Position
7:2978354..2980360
AA seq 477 aa
MLCGISGEAPQEPVVSKKSGVVYEKRLIDQYINEHGTEPDSGEALTTDDLLPIHSSRIVR
PRPPTLTSIPALLATFQNEWDALALETYNLKEQLARTREELATALYQHDAAVRVIARLTR
ERDEARDALSKVTVTGGAVDGDSMQVDSVEKLPEELVAKVDETHQTLSKGRKKRPVPEGW
ATGEEISAFESATTHSLPVPEATALTVGGTNAAAVGGLKGQAVVYSTTEDKVEQSLSVGE
PVTDAVWAEAGVAFATGQGSVKVFQEGNQVASLSEHAGAATALSLHPSGEILASVGTDKS
IVFYDLVAQKRVARAYTDAALTSCAFHPDGHLFAAGTTSGEIKLFMTNTLEQAASFSLGA
PIQALSFSENGYWFAATAKGQTMVTIFDLRKEGDAAVAKVLETGGPVQSLAWDYSGQFLA
TGGAAGVTVQQFTKSSKKWTEPLKSSTPSVAVRWGESAKQIVTVNGEGVVSVLATKE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgctttgcggaatttctggagaggctcctcaagagcccgtcgtttctaagaagtccggt
gttgtttacgagaagcgccttatcgatcaatatatcaacgaacatggcaccgagcccgat
tctggcgaggccctgaccaccgatgacctcctccccatccattcgtcgcgtattgtccga
ccgcgtcctcctaccctcacatcgattcccgctctcctcgctactttccagaacgaatgg
gacgcgctggctttagagacatataaccttaaggagcagcttgcgcgcaccagagaggag
cttgccacagcattgtatcagcacgacgctgctgtccgagttattgcacgactcacaagg
gagcgagacgaggccagggatgctttgagcaaggtcactgtgacaggaggtgcggtcgat
ggtgattctatgcaggtcgatagcgtggagaagttgccagaggaacttgttgccaaggtg
gacgagacccatcagacattatcaaagggtcgcaagaagcgtcctgtccccgagggttgg
gccaccggcgaagagatttcggctttcgagagcgcgaccacacactccttgcctgttcct
gaggctaccgcccttactgttggaggaaccaatgccgcggcagttggaggcttgaaggga
caggcagttgtctactctaccaccgaggataaggtcgagcagtctctctcagtgggtgag
cctgttacagacgctgtttgggctgaggccggtgtcgcatttgcgactggccaaggcagt
gtcaaggtcttccaggagggtaaccaggttgcatcactgagtgaacatgctggtgctgct
acggcattgagcctgcaccccagcggtgaaattctggcctctgttggtacagataagagc
atcgtgttctacgacttggtcgcacagaaacgtgttgcccgcgcttacaccgatgctgct
cttacatcttgtgccttccaccctgatggtcacctctttgccgccggtaccacatcaggc
gaaatcaagctcttcatgaccaacactcttgagcaggcagcttctttcagcctgggcgcc
cctatccaggctctcagcttctccgagaacggctactggttcgcagctacagccaagggc
cagaccatggtcactatttttgatctgcgtaaagagggagacgcggcggtggccaaggtt
cttgagactggcgggccggtccagtccctggcgtgggactacagtggccagttcctcgcc
actggcggtgcggctggagttacagtgcaacagttcaccaagtccagcaagaagtggacc
gagcctttgaagagttctacaccatccgttgctgttcggtggggagagtctgcaaagcag
atcgtaacagtcaatggtgagggtgtggtcagcgtacttgcaacaaaggaatag

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