Falco peregrinus (peregrine falcon): 101917319
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Entry
101917319 CDS
T02856
Symbol
PNLDC1
Name
(RefSeq) PARN like, ribonuclease domain containing 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101917319 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpg03019
]
101917319 (PNLDC1)
Enzymes [BR:
fpg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101917319 (PNLDC1)
Messenger RNA biogenesis [BR:
fpg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101917319 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101917319
NCBI-ProteinID:
XP_013160471
LinkDB
All DBs
Position
Un
AA seq
427 aa
AA seq
DB search
MKIRTSMWYIHTTFFSFLQHGELRMLNLPSLHLAFSSCLIMALTIISVVNRDVLKKAIDE
VTCWVGAAEEEETLILQDLSGYQVFEVQLVLRQALQNVWTQPLGDKKVMVKKVSPQHRWL
LENSPYDSCRKELILLSARGFTNLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYE
EFKRNIHNLFPVLIDTKTVTKSVWKKHPFPRVSNLLEIYSVLCSSNLNSKDSACPVITPA
SDCSRYAEKKCPHEAGYDAFLCGSVLLKSAHLLLCGYTDDAVEVDSSFSRYLPMLAEYLN
KVNVIRGGVASINFSGEDAPCQRPPLLVVHVRGWSGLNERQIRQEFKAFCHFDVRRLSKD
QFLLLSNKFKHVRRVLRDANHPPRLGVSIYRHWRHSPSISCLLQVSGIVALWSLLAFVLG
GAPCCSF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgaacaagtatgtggtacattcatacaacttttttctctttccttcaacat
ggggagttacggatgttgaatttgccctctctgcatctagcattcagttcctgtctcatt
atggctttgactataataagtgttgtgaacagggatgtgctgaagaaagctattgatgaa
gtgacctgttgggtgggtgcagcagaggaagaggagactctgattctgcaggatctgagc
ggctatcaggtgtttgaagttcagctggttctgagacaagctctccaaaatgtttggaca
caacctcttggagacaagaaggtaatggtgaaaaaagtgagtccacagcatcgttggctt
ctggagaactctccttatgactcctgccggaaggagctcattctcctatctgcccggggc
ttcactaacctcttccagacacttgttaaagccaagaagcccctggtgggacataacatg
cttatggaccttatgcatcttcatgacaagttctacaagccccttccagaaagctatgag
gagtttaaaagaaacattcacaacctgtttcctgtcctcatagacaccaagactgtaaca
aaatctgtctggaagaagcatccatttcctcgagtatctaaccttttggagatatattca
gttttgtgtagcagcaacctgaattccaaagattcagcatgcccagtgataactcctgca
agtgactgctcaagatatgctgagaagaaatgtcctcatgaggcaggctatgatgcattt
ctctgtggttcagttcttctgaagtcggctcatttgctactgtgcggatacacagatgat
gcagtggaggttgattcttctttctctcgatatctccccatgttagcagagtatctgaac
aaagtgaacgtcatccgaggtggtgttgctagcattaatttttctggggaagatgctccc
tgtcagcgtccgcctctcttggttgtccatgtccgaggctggtcagggctgaatgaaagg
cagattcgccaagagtttaaagcattttgtcactttgatgtgagacggctttcaaaggac
cagttccttcttctctccaataaatttaagcacgtcaggcgcgttctgcgagatgctaac
catccccctcgcctgggggtatccatctaccgccactggagacactctccgagcatcagc
tgcctgctgcaagtctctggtattgtggcactctggtctctcttggcctttgtactcgga
ggagctccctgctgttcattctaa
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