Francisella philomiragia O#319-029: BF30_407
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Entry
BF30_407 CDS
T03617
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF30_407 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpi03019
]
BF30_407 (pnp)
03016 Transfer RNA biogenesis [BR:
fpi03016
]
BF30_407 (pnp)
Enzymes [BR:
fpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BF30_407 (pnp)
Messenger RNA biogenesis [BR:
fpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BF30_407 (pnp)
Transfer RNA biogenesis [BR:
fpi03016
]
Prokaryotic type
tRNA degradation factors
BF30_407 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
DUF2087
Motif
Other DBs
NCBI-ProteinID:
AJI46937
LinkDB
All DBs
Position
complement(407010..409091)
Genome browser
AA seq
693 aa
AA seq
DB search
MKIFREVFELGNKEIVLETGGMARQADGSVTVSCGNNVVLVTTVVKKSVAAGADFFPLSV
HYLEKTYAAGKIPGGFLRREGRPSEEQILISRLIDRSIRPSFPDGFFNEIQIVATVLSYD
GSFSPDMLALIGASASLAISGAPYDDIIAGVRVGYTNGKYILNPNKEELKESDLDLVVSG
TDDAILMVESEANSLPESVMLGGILYAHKHLKTIINSISKLAKVSSKPRIEYTIYQINKL
LKSQIKSHFFGEIKNAYTIPSKQERNIKLNELRKNVLEHIFTSDVDGNEYSEKEVLEAFH
DIEKDLVRSNILEGKPRIDGRCTETIRPINVKIGVLPGVHGSALFTRGETQALVVTTLGS
DRDAQLVESLDGIEKSRYMLHYNFPPYSVGECGMVGMAPKRREIGHANLAKRATQAVFPN
EEAYPYVVRIVSEILESNGSSSMATVCGSSLSMMDAGVPIAEPVAGIAMGLIKDGAKYAV
LSDILGDEDHLGDMDFKVAGTRYGVTALQMDIKIKGISREILEQAFEQARTGRLHILGIM
NEVIREHKESVSDVAPQIHIMNVNPAKIKDVVGRGGSVVKGIVEKTGAQIDTSDSGEVKI
FAKDKRSLDLAKSMVEEIVAEVEEGQIYKGKIVKLLDSGAFVNLLGSQDGYLPFSEIEQA
GMKTNSLVEGQGLEVLVQNIDRGGRVKLSLVAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatatttagagaagtctttgaactaggtaacaaagaaatagttctagaaacaggt
ggaatggctcgtcaagcagatgggtctgtgactgtaagttgtggtaataatgttgtgttg
gtgactacagtagtcaaaaaatcagtagcagcaggcgctgatttctttccattgtcagtg
cactatttagaaaaaacatatgctgctggtaagatacctggaggtttcttaagaagagaa
ggaagaccatctgaagagcaaattcttatttctagattaatagatagatctataagacca
tcattccctgatggattttttaatgagattcagattgtagctacagtcttatcttatgat
ggatcgttttctccggatatgttggctttgataggagcatctgcttctttagcaatatca
ggagctccttatgatgatattattgctggtgtaagagtcggttatactaatggtaagtat
attcttaatcctaacaaagaggaactaaaagagtctgatttagacttagtcgtttctggt
acggatgatgcgatactaatggttgagtcagaggctaatagcttaccagaatctgtaatg
cttggcggtattttatatgcgcataagcatcttaagactattatcaattctattagtaaa
ctggctaaagtatcatctaaaccacgtatagaatatacaatttatcaaattaataagtta
ttaaagtctcaaattaaatcacatttttttggcgagattaaaaatgcttatacaatacca
tctaagcaagaaagaaatattaagcttaacgaactgagaaaaaatgttttagagcatata
tttacaagtgatgtcgatgggaatgagtattctgaaaaagaagttctagaagcttttcat
gatatagaaaaagatcttgttagatcaaatatcttagaaggcaagccaagaatcgatggt
agatgcacagaaactattagaccaataaatgttaaaataggagtgttacctggagtacat
ggttcagctctatttacaagaggtgaaacacaagctctagtggttacaactcttggaagt
gatagagatgcacaacttgttgaatctttagacggtattgaaaaatcgcgttatatgctt
cactataattttcctccatattctgtaggcgagtgtggtatggtaggtatggctccgaag
cgccgtgaaatcggtcatgcaaacttagctaagcgtgctactcaagcagtttttcctaat
gaagaggcatatccatatgtggttagaatagtatctgagatattagagtcaaatggttct
agttctatggcaactgtttgtggctcgtcattatctatgatggatgcaggtgtgcctata
gctgagcctgtagcaggtattgctatggggcttatcaaggatggtgctaaatacgctgta
ttatccgatattttaggtgatgaagatcacttaggtgatatggattttaaagttgctggt
actagatatggtgttacagctcttcaaatggatatcaaaattaaagggatatctagagaa
attcttgagcaagcttttgaacaagcaagaactggtagactacatatactaggaattatg
aatgaagtgatcagagagcataaagaatctgtttctgacgttgctccacaaattcatatt
atgaatgtaaatcctgctaaaataaaagatgttgttggtcgtggtggttctgtagtaaaa
ggcattgtagaaaagacaggtgcgcagatagacactagtgactcaggtgaagttaagatt
tttgctaaagataaaagatccttagatttggctaaatctatggttgaagagattgttgca
gaggttgaagaaggacaaatttataaaggtaaaattgttaagcttttagattctggagca
tttgttaatcttcttgggagccaagatggatatttaccattctctgaaattgaacaagct
gggatgaaaactaattcattagtagagggtcagggcttggaagttttggttcaaaatatt
gatagaggtggtagagttaaactttctcttgttgcgaggtaa
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