Flavobacterium psychrophilum v4-33: IA06_02455
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Entry
IA06_02455 CDS
T03661
Name
(GenBank) 2-dehydro-3-deoxyphosphogluconate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk00541
Biosynthesis of various nucleotide sugars
fpk01100
Metabolic pathways
fpk01250
Biosynthesis of nucleotide sugars
Module
fpk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IA06_02455
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fpk01005
]
IA06_02455
Enzymes [BR:
fpk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IA06_02455
Lipopolysaccharide biosynthesis proteins [BR:
fpk01005
]
Lipid A
IA06_02455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
T4_Y13H
Motif
Other DBs
NCBI-ProteinID:
AIG40736
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All DBs
Position
complement(552496..553314)
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AA seq
272 aa
AA seq
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MNLQNIPKIKHLDSGNFFILAGPCAIEGEEMAMRIAEKLVGITDKLQIPYVFKGSFKKAN
RSRIDSFSGIGDEKALKILEKVSAAFGVPTVTDIHTNEDAAMAAAYVDILQIPAFLVRQT
DLVVAAANTGKVVNLKKGQFMSPESMKHAVQKVLDCNNPNVMLTDRGSMFGYQDMIVDFR
GIPTMQTMATTVLDVTHSLQQPNQVAGVTGGRPDMIETIAKAGIAVGVDGIFIETHFDPA
NAKSDGANMLHLDYFEGLMTKLVAIRQTINIF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaaaatatacctaaaattaaacatttagatagcggaaatttctttatcctt
gctggtccatgtgcaattgaaggagaagaaatggccatgagaattgccgaaaaattagta
ggaattacagataaattacaaattccttacgtttttaaaggctcattcaaaaaagcaaat
cgatcaagaattgatagcttttcaggaattggcgacgaaaaagcactaaaaattttagaa
aaagtatccgcagcatttggtgtgccaaccgttacagacattcatacaaatgaagatgcg
gctatggctgcagcttacgtagatattttgcaaatccctgctttcttagttcgacaaaca
gatttagttgtggctgctgccaataccggaaaagtggtcaacttaaaaaaaggacaattt
atgagtcccgaaagtatgaaacacgccgttcagaaagttctagattgcaacaacccaaac
gtaatgcttaccgacagaggatctatgtttggctaccaagatatgattgtcgattttcgt
ggcattcccaccatgcaaaccatggcaactaccgtactcgacgtaacccactccttacaa
caacccaaccaagtagctggtgtaactggtggtcgcccagatatgatcgaaacaattgcc
aaagccggaatagccgtaggtgtagatggaatttttatagaaactcatttcgaccccgca
aatgcaaaaagtgacggagcaaacatgcttcacctagattattttgaaggattaatgact
aaattagttgccattagacaaaccatcaatattttttaa
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