Flavobacterium psychrophilum v4-33: IA06_12390
Help
Entry
IA06_12390 CDS
T03661
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
fpk
Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpk03016
]
IA06_12390
03036 Chromosome and associated proteins [BR:
fpk03036
]
IA06_12390
Transfer RNA biogenesis [BR:
fpk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
IA06_12390
Prokaryotic type
IA06_12390
Chromosome and associated proteins [BR:
fpk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
IA06_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
Pyr_redox
FAD_binding_2
HI0933_like
AlaDh_PNT_C
ThiF
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIG42550
UniProt:
A0A7U2T8U1
LinkDB
All DBs
Position
2680983..2682854
Genome browser
AA seq
623 aa
AA seq
DB search
MFLEEYDVIVVGAGHAGCEAAAASANLGCSTLLVTMSLQNIAQMSCNPAMGGIAKGQIVR
EIDALGGYSGIVSDNTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRLMLEGTPNLDFY
QEMVSGMVIENNKVLGIKTSLGLTIRGKSVVLTNGTFLNGLIHIGDKQFGGGRAGESAAY
GITEDLVKAGFESGRMKTGTPPRVDGRSLDYSKMNVEAGDINPSKFSYSDVTKPLVHQRD
CHMTYTSLLVHDILREGFERSPMFNGRIKSLGPRYCPSIEDKINRFADKDRHQLFVEPEG
WNTCEVYVNGFSTSLPEDIQFKALRSVVGFEKVKFFRAGYAIEYDYFPPTQLKHTLETKL
ISGLYFAGQINGTTGYEEAASQGLMAGINAALKVKEKEPLILKRDEAYIGVLIDDLITKG
TEEPYRMFTSRAEFRTLLRQDNADFRLTPMSNTLGLASDARLRRMEHKLNESEKMVAFFK
ETSITPTEANPVLIAKKTAEVNQTDKIFKILSRPQIDLSDVLKFENVANYVANNNVDQEI
LEQAEIQVKYSGYIDKERANAEKLTRLEDLKIPEKFDYHQIKSMSIEAKQKLSKIRPVTI
SQASRISGVSPSDISVLLVFLGR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagaagaatatgatgttattgttgttggtgctggtcatgcaggctgtgaggct
gcagcggcatcggcaaatttaggttgttctaccctattggttacaatgagcttgcaaaac
attgcgcaaatgtcttgtaaccctgctatgggtggaattgcaaaaggacaaatagttcgt
gagattgatgcgttaggtggttattcaggaattgtttccgataatacagcaattcaattc
aagatgcttaataaatcgaaaggacctgctatgtggtcgccaagagttcaaagcgaccgc
atgcgttttgctgaagaatggcggttgatgttagaaggaacgcctaatcttgatttttat
caagaaatggtttccggaatggttatcgaaaataataaggttttaggtattaaaacttct
ttaggtttaaccattcgaggcaaatctgtggtgcttacaaacggaacttttcttaatggg
ttaattcatattggggataaacaatttggaggaggtcgtgctggcgaaagtgctgcttac
ggaattaccgaagatttagtaaaagctggtttcgaatctggtagaatgaaaacaggaaca
ccacctcgagtagatggtcgttcgttagattattctaaaatgaatgtagaagcgggtgat
ataaacccatctaaattttcctattcagatgtaacaaagccattagtgcatcagagagat
tgtcacatgacttatacctctcttttggttcatgatatattgcgtgaaggtttcgaacgt
tcgccaatgtttaacggacgtattaaaagtttgggtccaagatattgcccttctatcgaa
gataagataaatcgttttgccgataaagaccgtcatcaattatttgtagaaccagaaggc
tggaacacttgcgaggtttatgtaaacggattttctacatcactgccagaggatattcaa
tttaaagccttgcgttctgttgttggtttcgaaaaagtaaagttctttagagcgggttat
gctatcgaatatgattacttccctcctacgcaacttaaacatactttagaaactaaatta
atttctggtttgtattttgcaggtcaaataaacggaactacaggttacgaagaagccgct
tctcaaggtttaatggctggaataaatgcagcactcaaggtaaaagaaaaagaaccttta
atcttaaaacgagacgaagcttatataggagttttaatagatgacttaattacaaaaggt
accgaagaaccgtacagaatgtttacttctcgtgcagagtttagaaccttattgcgtcaa
gacaatgccgattttagattaacgcccatgtctaatacattaggtttagcttctgatgct
cgtttgcgcagaatggaacacaaactaaatgaatcagaaaaaatggtagctttctttaaa
gaaaccagcattactcctactgaagcaaatccggttttaattgcaaaaaaaaccgccgaa
gttaatcagaccgataagatttttaaaatactatctcgtccgcaaattgatttgtccgat
gttttaaaatttgaaaatgtggcaaattatgttgctaataataatgttgatcaagaaata
ttagaacaagcagaaattcaagttaagtattctggttatatcgataaagaaagagccaat
gccgaaaagttaactcgtttagaagatttaaaaatacctgaaaaattcgattaccatcaa
ataaaatctatgtctattgaggccaaacaaaaattatctaaaataagaccagtaaccatt
tcgcaagcctcaagaatatctggagtttcgccaagtgatatttcggtcttattggttttt
ctgggaagataa
DBGET
integrated database retrieval system
