Fictibacillus phosphorivorans: ABE65_012360
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Entry
ABE65_012360 CDS
T04282
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABE65_012360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpn03400
]
ABE65_012360
Enzymes [BR:
fpn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ABE65_012360
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABE65_012360
DNA repair and recombination proteins [BR:
fpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABE65_012360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-TFIIB
OrfB_Zn_ribbon
zinc-ribbons_6
Zn_Tnp_IS1595
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANC77547
UniProt:
A0A160IN95
LinkDB
All DBs
Position
complement(2406001..2406804)
Genome browser
AA seq
267 aa
AA seq
DB search
MPELPEMETYREFLNHNILHKPITHVEINREKSINTGVQTFIDAVQGSNITFVKRRAKHL
IFELSSGQYLLLHLMLGGLMFLGTSKNSPDRTKQIILSFGELQLNFIGLRLGYLHLLNQT
ELDEKLSDLGPEPFELQRDEFLERLERKKGALKPLLVDQSFIAGIGNCYSDEICFQARLH
PLRKASDLSDEEKNHLYDSFKPVLSRAIQFGGYMDFPMYEGNKQTGKYNENTYVYEREGE
NCPRCGGTIERVDHSSHKSFYCPNCQK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagttaccagagatggaaacgtatcgtgagttcttgaatcataatatcttacat
aagccgattacgcatgtagagatcaacagagagaagtccattaacacaggggttcaaacc
tttattgatgcggtacaaggatcaaatatcaccttcgttaaaagaagagcaaaacatctg
atctttgagctaagttcaggacagtatctattgcttcatttgatgcttggaggactgatg
tttcttggaacttcaaaaaacagtccagatcgaaccaaacaaattattttgtcgtttgga
gagctgcaacttaactttattggtcttcgccttggatatttacatctactgaatcaaacg
gaactagatgaaaagctcagcgatcttggtccagaaccatttgaattgcagagggatgag
tttttagaaaggttagaacgaaaaaaaggggcactcaaaccattgttagtcgatcaatcc
tttattgctggaatcggaaactgctattccgatgaaatatgctttcaagcaaggcttcat
cctttacgaaaagcgagcgacctttctgatgaggagaaaaaccatttgtatgatagcttc
aaacctgttctttcaagagccatacaatttggtgggtatatggattttccgatgtacgaa
ggtaataagcagacaggaaagtataacgagaatacatatgtttatgagcgagaaggtgag
aactgtccgagatgtggagggacgattgagagagtggatcattcttcacataagtcgttt
tattgtccgaactgccagaagtaa
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