Frischella perrara: FPB0191_00712
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Entry
FPB0191_00712 CDS
T03525
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fpp
Frischella perrara
Pathway
fpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPB0191_00712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpp03019
]
FPB0191_00712
03016 Transfer RNA biogenesis [BR:
fpp03016
]
FPB0191_00712
Enzymes [BR:
fpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FPB0191_00712
Messenger RNA biogenesis [BR:
fpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FPB0191_00712
Transfer RNA biogenesis [BR:
fpp03016
]
Prokaryotic type
tRNA degradation factors
FPB0191_00712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
aRib
S1_2
Rep-A_N
DUF5813
LodA_N
Motif
Other DBs
NCBI-ProteinID:
AJA44541
UniProt:
A0A0A7S5K6
LinkDB
All DBs
Position
802455..804560
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AA seq
701 aa
AA seq
DB search
MFKPVSQKFQYGRHTVTLETGIMARQATAAVMVNMDDTAVFVTVVADKKVKEGQDFFPLT
VNYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPLRPLFPEGFVNEIQIIATVVSV
NPQVSPDLVAMIGASAALCLSGVPFHGPIGAARVGFIDDEFVLNPLVNELPKSRLDLVVA
GTDSAVLMVESEADLLTEEQMLAAVVFGHEQQQVVINNINEFVAKADVEKWDWVAPAKNE
ALYNAVAELAKERIGEAYRITQKQDRYAQIDQIKEDVLAALKAENEELNEVEILNIITDI
ESQTVRQRVLAGELRIDGREKDMIRALDVRTNVLPRTHGSALFTRGETQALVTATLGTER
DAQIIDELTGEVTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVAAVMPKPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKASVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGTSEGVSALQMDIKIEGITKEIMQIALNQAKGARLHILNVMEQA
INRPREEISEFAPRIYTMKINPEKIRDVIGKGGATIRALTEETGTTVEIDDDGTVKIAAS
DGNKAKAAMQRINELTAEVEVGQIYNGKVVRIVDFGAFVSIIGGKEGLVHVSQIADHRVE
KVTDVLSVGQEVPVKVLEIDRQGRIRLSIKDAITNDSEQSE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaaccagttagtcaaaaattccaatatggtcgtcatacagttacgttagaaacc
ggtattatggcacgtcaggcaacagcagctgttatggtcaatatggatgatacagcagta
tttgtaacagtggttgctgataaaaaagttaaagaagggcaagacttttttccattgact
gtcaactatcaagagcgtacttatgctgctggtcgtattcctggtggcttttttaagcgt
gaaggacgtcctagcgaaggtgaaaccttaattgcacgtttgatcgatcgtccattacgt
cctttattccctgaaggatttgtgaatgaaatccaaattatagcgactgttgtgtcagta
aacccacaagtaagccctgatttagttgctatgatcggtgcatcagcagcattatgctta
tcaggtgtaccttttcatggtccaattggtgcagcgagagtaggttttattgatgatgaa
tttgtattaaatccgttagttaatgaattaccaaaaagccgtttagatttagttgtagcg
ggtacagatagtgcagtgttaatggttgaatctgaagctgatttattaacagaagaacaa
atgcttgcagcagtagtatttggtcatgaacaacaacaagttgttataaataatattaat
gagtttgttgcaaaagcagatgtcgaaaaatgggattgggttgcaccagcaaaaaatgaa
gccctttacaatgcagtagctgaattggctaaagagcgaattggtgaagcttatcgcatt
actcaaaaacaagatcgttatgcacaaattgaccaaattaaagaagatgttctagctgca
ttaaaagctgaaaatgaagaattaaatgaagtcgaaatattaaatataattacagatatt
gaaagtcaaaccgtacgtcaacgtgtattagccggtgaactgcgtattgatggacgagaa
aaagatatgattcgagcattagatgttcgaactaatgtattaccaagaacacatggtagt
gcactatttactcgtggagaaactcaagcattagttacagccactttaggtactgaacgt
gatgcacaaattatagatgaactaacaggtgaagtgactgatcggttcttattccattat
aatttccctccttattcagtaggtgaaacgggtatggtaggttcgcctaaacgccgtgaa
atcggtcatggtcgtttagcaaaacgtggcgtagcggctgttatgcctaaaccaagtgaa
ttcccttatactgtacgcgtggtatcagaaatcactgaatctaatggttcttcttcaatg
gcttccgtatgtggtgcctctctagctttaatggatgcgggtgtaccaattaaagcatct
gttgcaggtattgcaatggggctagtaaaagaaggtgataattttgtagtattatctgat
attttaggcgatgaagatcatttaggcgatatggattttaaagttgcaggtacgagtgaa
ggtgtaagtgcattgcaaatggatattaaaatcgaaggtattactaaagaaatcatgcaa
attgccttaaatcaggccaaaggtgcacgtttacacattttaaatgtgatggaacaagca
ataaatcgtcctcgtgaggaaatttcagagtttgctccacgcatttataccatgaaaatc
aatccagaaaaaatacgtgatgttattggtaaaggcggtgcaacaattcgtgcgctgact
gaagagaccggaaccacggttgaaattgatgatgatggtacagttaaaattgctgcttca
gatggcaataaagctaaggcagcaatgcaacgcatcaatgaattaactgcggaagttgaa
gtcggacaaatttataatggtaaagttgttcgtatcgtagactttggtgcttttgtatcg
atcatcggtgggaaagaaggcttagttcatgtttcacaaattgccgatcatcgcgttgaa
aaagtaactgatgttctatctgtagggcaagaagtgccagtcaaagtacttgaaattgat
cgtcaagggcgtatacgtttgagtattaaagatgctatcactaatgatagtgagcaatct
gagtaa
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