Flavobacterium psychrophilum 950106-1/1: IB65_04810
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Entry
IB65_04810 CDS
T03412
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fpq
Flavobacterium psychrophilum 950106-1/1
Pathway
fpq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IB65_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpq03400
]
IB65_04810
Enzymes [BR:
fpq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IB65_04810
DNA repair and recombination proteins [BR:
fpq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IB65_04810
Prokaryotic type
IB65_04810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIT65222
UniProt:
A0A7U2RLH6
LinkDB
All DBs
Position
complement(1070035..1070697)
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AA seq
220 aa
AA seq
DB search
MINANSWLGFFEIEKEKPYFEDLMKTIDQEYENYSCFPAKDLIFNAFNFCDFTNLKVVII
GQDPYHGVGEANGLCFSVNDGVKIPPSLKNIFAEINAEYDLVFSPTSGNLESWAKQGILL
LNASLTVRKDLANSHKHLKWNVFTDAVIEYVSTHSQRVVFLLWGSFAHKKGRKIDRERHL
VLESGHPSPLSANRGFWFGNNHFRLTNEYLKLNGFSEIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgctaattcttggttgggtttttttgaaattgaaaaagagaagccttatttt
gaagatttaatgaaaactattgatcaagaatatgaaaattattcttgttttcctgcaaag
gatttgatttttaatgcttttaatttttgtgattttacaaatttgaaggtggttattatt
ggtcaggatccttatcatggggttggggaagctaatggtttgtgtttttctgtaaatgat
ggtgtaaaaattccgccttcgttaaagaatatttttgctgaaataaatgctgaatatgat
ctagttttttcgccaacttctggtaatttagagtcttgggcaaagcaaggaattttactt
ttaaatgcttccttaacggttcgtaaggatttggctaacagccataaacatttgaaatgg
aacgtttttaccgatgctgttatcgagtatgtttctactcattctcaacgggttgttttc
ttgctttggggtagttttgcgcacaagaaagggcgtaaaatagatagggaaaggcatttg
gttcttgaatctggacatccttcgccattgagtgctaatcgtggtttttggtttggaaat
aatcattttaggttaaccaatgagtacttaaaattgaatggtttttctgaaattgaatgg
taa
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