Faecalibacterium prausnitzii L2-6: FP2_10000
Help
Entry
FP2_10000 CDS
T02591
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpr
Faecalibacterium prausnitzii L2-6
Pathway
fpr03410
Base excision repair
fpr03430
Mismatch repair
fpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FP2_10000
03430 Mismatch repair
FP2_10000
03440 Homologous recombination
FP2_10000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpr03400
]
FP2_10000
DNA repair and recombination proteins [BR:
fpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FP2_10000
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FP2_10000
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FP2_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
ThiG
Motif
Other DBs
NCBI-ProteinID:
CBK98554
UniProt:
D4K4W1
LinkDB
All DBs
Position
975998..978127
Genome browser
AA seq
709 aa
AA seq
DB search
MTYRAWNTKTVDRAALKELTAAIAQQNTEELEYQNMDEEWSEEKYRSVLAAQQKEAGLLA
GILAARGITDPAEALTLLAGEEELSDPMLLTDMDKACERILRAIDEGEMIVVFGDYDVDG
VTATALLYQHLKGMGAAVKCMLPSREGDGYGLSKNAIQSIYDKGCRLIVTVDNGISAVEE
AAFAASLGIDLIITDHHLPHDTLPQAAAIVDPRRADDHSPFKGLCGAGVAFKLCAALDGC
PPEEMLEYCGDLAAVGTVADVMPLTGENRTIVKAGLRQLQNTDRPGFCALLEEVGLAGKP
VTAENISYAIAPRINAAGRMDSAVTALQLVLCEDEDRAVELAHKLSDINIQRQETEMEIV
KAAQELLDAEPERLEDRVILLWGRDWHPGVIGIVASRLVEKTGRPVIVVSVDEHGEGKGS
GRSVQGFNLHECIASCADILLRFGGHAMAAGLSVREEDLQTLRQRLNDWAARECPVLRTP
PLECDLSVHLDRLTVESVRRLDQLAPYGADNPSPVFVLEMAVVEGVYAVSEGKHCRLRLR
QGNSSIYAVWFGMHPEQVPYSTGDVVDAAISLSVYDSPRGAQLSGRIIELHPAGLGNTAA
EQAALVQALRRGTPLTPEQKESIAPERSHIITVYRELQARRWHAEDLQPLFAKLGEENTG
RTLVAVAALEQVGLITAADRGGAKFWELVPATGKKNLADAPILKCLEER
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccgggcctggaacaccaagactgttgaccgcgccgccctgaaagagctgaca
gcggccatcgcccagcagaacaccgaagagctggaataccagaacatggacgaggagtgg
agcgaggaaaagtaccgctctgtcctcgcggcccagcagaaagaagccggcctgctggcc
ggcatcctcgctgcccggggcatcaccgaccccgccgaggcgctgacccttctagcgggc
gaagaagagctgagcgaccccatgctcctgaccgacatggacaaagcctgtgagcgcatc
ctgcgggccatcgacgagggggagatgatcgtcgtcttcggcgactacgacgtggacggt
gtgaccgccacggccctgctctatcagcacctgaaagggatgggtgccgccgtcaagtgt
atgctgcccagccgggagggcgacggctacggcctctcgaagaatgccatccagtcgatc
tacgataagggctgccgcctcatcgtcacggtggacaacggcatctctgccgtagaggaa
gccgcattcgcggccagcctcggcatcgacctcatcatcacagaccaccatctgccccac
gacaccctgccccaggcagcggccatcgtggacccccgccgtgccgacgaccacagcccc
ttcaagggcctgtgcggcgcgggcgtggccttcaagctctgcgccgcgctggatggctgc
ccgccggaagagatgctggaatactgcggcgacctcgccgctgttggcaccgtggccgac
gtcatgcccctgacaggggagaaccgcaccatcgtcaaagccggtctgcgccagctgcaa
aatacggacagacccggcttttgcgcccttttggaagaagtgggccttgcaggcaagccg
gtgacggcagagaacatcagctacgccatcgcgccccgcatcaatgcggcgggccggatg
gacagcgctgtcaccgctttgcagctggtgctctgtgaggacgaagaccgggcggtcgaa
ctggctcataagctgagcgacatcaacatccagcggcaggagacggagatggagatcgtc
aaagccgcgcaggaactgctggacgctgaaccggaacgcctcgaagaccgggtcatcctg
ctctggggcagagactggcaccccggcgtcatcggcatcgtggcctcccgccttgtggaa
aagaccggacgtccggtcatcgtggtgtcggtagatgagcacggcgagggcaagggcagc
ggccgcagcgtgcagggcttcaacctgcacgagtgcatcgcctcctgcgccgacatcctg
ctccgcttcggcggccacgccatggcagcgggcctctcggtgcgggaagaggatctgcag
acgctccgccagcggctcaacgactgggcggcccgggagtgtcccgtgctgcgcaccccg
ccgctggaatgcgatctatccgtccacctcgaccgcctgacggtggagagcgtccgccgc
ctcgaccagctggcaccctacggtgccgacaaccccagcccggtcttcgtgctggaaatg
gctgtcgtggagggcgtctacgccgtctcggagggcaagcactgccgcctgcgtctgcgg
cagggcaattccagcatctacgccgtctggttcgggatgcacccggaacaggtgccttac
tcgacgggcgacgtcgtggacgcagccatcagcctttcggtctacgattcgccccggggc
gcacagctgtcgggccgcatcatcgagctgcacccggcgggcctcggcaacacagctgca
gagcaggccgcgctggtgcaggcgctgcgccggggtacgcccctgacgccggagcagaag
gagagcatcgccccggagcgcagccatatcatcaccgtttatcgagagctgcaggcgcgg
cgctggcacgccgaagacctgcagcccctgtttgcaaaactcggcgaggagaacaccggt
cggacgctggtggccgtcgccgcgctggaacaggtcggcctcatcacagcggctgaccgg
ggcggggcaaagttctgggaactcgtgcctgccaccggaaagaagaaccttgccgatgcg
cccatcctgaaatgtctggaggaacgataa
DBGET
integrated database retrieval system
