Fusarium pseudograminearum: FPSE_04109
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Entry
FPSE_04109 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FPSE_04109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_04109
Enzymes [BR:
fpu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
FPSE_04109
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
FPSE_04109
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
FPSE_04109
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
FPSE_04109
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
FPSE_04109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
Cupin_7
Motif
Other DBs
NCBI-GeneID:
20362727
NCBI-ProteinID:
XP_009255502
UniProt:
K3VLC4
LinkDB
All DBs
Position
4:complement(2639672..2640563)
Genome browser
AA seq
279 aa
AA seq
DB search
MSHQDSEPEEAITKEEIRGEEPRGKANHNAFTELMTPKRKTPPSTVAARPARSGNPFRDR
MGLGAYLEDPASYPSSRVIYHNDDFVAINDRYPKATIHTLLLPRSSKHNLLHPFDALDDP
EFLASVRAETQRLKTLVVKELQRSLGAHSHSDAHRQAVLEGDAEPDKSGELPGGRDWTTE
VKAGVHAVPSMKHLHVHVLSRDMFSEALRHRKHYNSFNTPFLVDLDDFPLPADDARRHTK
EEAYLRWDMKCWRCERNFGNQFQKLKGHLAEEYEAWKKL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaccaagactcagagcctgaagaggccatcacaaaggaggagattcgcggcgaa
gaaccacggggaaaggcaaatcacaatgcattcacagaactcatgacaccgaaaagaaaa
acaccaccatccaccgtcgcagctcggcctgcacggagcggaaaccctttcagagataga
atgggcctgggtgcatatttggaagaccctgcctcgtacccatcttctcgagtcatctac
cacaatgatgactttgtagccatcaatgatcgctatccaaaagccactattcatacactc
cttctccctcgctcttcgaaacacaatcttcttcatcctttcgacgcgctggatgaccca
gagtttctcgccagcgtaagagccgagactcagcgcctcaaaaccctggtggtcaaggaa
ctgcagcgttctctcggagcgcacagccacagcgacgcgcaccggcaagctgtgctcgag
ggcgatgctgagccagataagagcggggaacttcccgggggtcgggactggacgacagaa
gtcaaggccggtgtgcatgcggtgccaagcatgaagcacttacacgtgcatgtcctgtca
agggacatgttctcagaagcactgaggcatcgcaaacactacaactcgttcaatactccc
tttctcgtcgacctggacgacttccccctcccagctgacgatgcgcgtcgacacacaaaa
gaagaagcctatttgcgctgggacatgaagtgctggagatgtgagcgcaactttggaaac
cagttccaaaagttaaagggacatcttgcggaggagtacgaggcatggaagaagctctaa
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integrated database retrieval system