Flavobacterium psychrophilum V4-24: IA04_02415
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Entry
IA04_02415 CDS
T03660
Name
(GenBank) 2-dehydro-3-deoxyphosphogluconate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fpw
Flavobacterium psychrophilum V4-24
Pathway
fpw00541
Biosynthesis of various nucleotide sugars
fpw01100
Metabolic pathways
fpw01250
Biosynthesis of nucleotide sugars
Module
fpw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
fpw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IA04_02415
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fpw01005
]
IA04_02415
Enzymes [BR:
fpw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IA04_02415
Lipopolysaccharide biosynthesis proteins [BR:
fpw01005
]
Lipid A
IA04_02415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
T4_Y13H
Motif
Other DBs
NCBI-ProteinID:
AIG36203
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All DBs
Position
complement(541359..542177)
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AA seq
272 aa
AA seq
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MNLQNIPKIKHLDSGNFFILAGPCAIEGEEMAMRIAEKLVGITDKLQIPYVFKGSFKKAN
RSRIDSFSGIGDEKALKILEKVSAAFGVPTVTDIHTNEDAAMAAAYVDILQIPAFLVRQT
DLVVAAANTGKVVNLKKGQFMSPESMKHAVQKVLDCNNPNVMLTDRGSMFGYQDMIVDFR
GIPTMQTMATTVLDVTHSLQQPNQVAGVTGGRPDMIETIAKAGIAVGVDGIFIETHFDPA
NAKSDGANMLHLDYFEGLMTKLVAIRQTINIF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaaaatatacctaaaattaaacatttagatagcggaaatttctttatcctt
gctggtccatgtgcaattgaaggagaagaaatggccatgagaattgccgaaaaattagta
ggaattacagataaattacaaattccttacgtttttaaaggctcattcaaaaaagcaaat
cgatcaagaattgatagcttttcaggaattggcgacgaaaaagcactaaaaattttagaa
aaagtatccgcagcatttggtgtgccaaccgttacagacattcatacaaatgaagatgcg
gctatggctgcagcttacgtagatattttgcaaatccctgctttcttagttcgacaaaca
gatttagttgtggctgctgccaataccggaaaagtggtcaacttaaaaaaaggacaattt
atgagtcccgaaagtatgaaacacgccgttcagaaagttctagattgcaacaacccaaac
gtaatgcttaccgacagaggatctatgtttggctaccaagatatgattgtcgattttcgt
ggcattcccaccatgcaaaccatggcaactaccgtactcgacgtaacccactccttacaa
caacccaaccaagtagctggtgtaactggtggtcgcccagatatgatcgaaacaattgcc
aaagccggaatagccgtaggtgtagatggaatttttatagaaactcatttcgaccccgca
aatgcaaaaagtgacggagcaaacatgcttcacctagattattttgaaggattaatgact
aaattagttgccattagacaaaccatcaatattttttaa
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