Frankia casuarinae: Francci3_0679
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Entry
Francci3_0679 CDS
T00320
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
fra
Frankia casuarinae
Pathway
fra00020
Citrate cycle (TCA cycle)
fra00190
Oxidative phosphorylation
fra00650
Butanoate metabolism
fra00720
Other carbon fixation pathways
fra01100
Metabolic pathways
fra01110
Biosynthesis of secondary metabolites
fra01120
Microbial metabolism in diverse environments
fra01200
Carbon metabolism
Module
fra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
fra_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Francci3_0679
00650 Butanoate metabolism
Francci3_0679
09102 Energy metabolism
00190 Oxidative phosphorylation
Francci3_0679
00720 Other carbon fixation pathways
Francci3_0679
Enzymes [BR:
fra01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Francci3_0679
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
ABD10063
UniProt:
Q2JF79
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Position
complement(775391..777145)
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AA seq
584 aa
AA seq
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MQVHRYDAVIVGAGGAGMRAAIEAGTRCRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAPVRRSCYAADRTGHMILQTLYQQCVKHDIEFFNEFYVLDLLLQKGAAAGVVAYE
LKTGEIHIFQAKSVVFATGGFGKVFKVTSNAHTLTGDGMGLAFRRGIPLEDMEFFQFHPT
GIWKMGILLTEGARGEGGILRNKDGERFMERYAPTIKDLAPRDMVARAIYTEIRAGRGCG
PDADHVYLDLTHLPPEHLDAKLPDITEFARTYLGIEPYNDPIPIQPTAHYAMGGIPTNVD
AQVLADNDTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANANAQH
VDLPENPASFVEDLLGRLRAGAGTENAAAIRRELQESMDVNASVYRTEATLKQALSDISG
LKTRYQRVGVSDRGRRYNTELLEAVELGFLLDLAEVLVIGAMARNESRGGHSREDYPNRD
DVNFMRHTMAYRSGPLVAASPEAEIRLDYKPVVMTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtccacaggtacgacgcagtcatcgtcggtgcgggtggagccggcatgcgtgcc
gccatcgaggcgggcacccgctgccggaccgccgtgctcaccaagctctatcccacccgc
tcgcacaccggcgcggcgcagggcggcatgtgtgccgccctggccaacgtcgaggaggac
aactgggagtggcacaccttcgacacgatcaagggcggtgactacctggtcgaccaggac
gccgcggaaatcatggcgaaggaggccatcgacgctgtcctcgacctggagaagatgggg
ctgccgttcaaccggacgcccgagggtcgcatcgaccagcgccggttcggcggccatacc
cgcgaccacggcaaggccccggtgcgccgctcctgctacgcggcggaccgcaccgggcac
atgatcctgcagacgctgtaccagcagtgcgtcaagcacgacatcgagttcttcaacgag
ttctacgtcctcgacctgctactacagaagggcgcggcggccggggtggtcgcctacgag
ctgaagaccggagagatccacatcttccaggccaagtcggtggtgttcgccaccggcggt
ttcggcaaggtcttcaaggtcacctccaacgcgcacacactgaccggtgacggaatgggt
ctggcgttccggcggggcatcccgctggaggacatggagttcttccagtttcatccgacc
ggcatctggaagatggggattctcctcaccgagggtgcccgcggcgagggcggaatccta
cgcaacaaggacggcgaacgcttcatggagcgctacgccccgaccatcaaggaccttgcg
ccacgcgacatggtggctcgcgccatctacaccgagatccgtgccggccgcggctgcggc
ccggacgccgaccacgtctaccttgacctcacccacctgccgccggagcacctcgacgca
aagctgcccgacatcaccgagttcgctcggacctatctcggcatcgaaccgtacaacgac
ccgatcccgatccagccgacggcgcactacgcgatgggcggcatcccgaccaacgtggac
gcgcaggtgctcgcggacaacgacacggtcgtgcccggtctgtacgcggccggcgaggtg
gcgtgcgtgtccgtgcatggcgcgaaccggctgggcaccaactcgctgctcgacatcaac
gtattcggccggcgggctggcatcgccgccgccgagtatgcgaacgcgaacgcacagcac
gtcgacctcccggagaacccggcgtcgttcgtcgaggacctgctcgggcgcctgcgcgcg
ggcgccggaaccgagaacgcggccgcgatccggcgcgaactgcaggagtcgatggacgtc
aacgcctcggtgtaccggacggaggcgacgctcaagcaggcgctgagcgacatctccggc
ctcaagacgcgttaccagcgggtgggcgtgtccgaccgggggcgtcgctacaacaccgaa
ctgctcgaagcggtggagctcggcttcctgctggacctcgccgaggtcctggtcatcggg
gcgatggcccgcaacgagtcccgcggcggccactcccgtgaggactacccgaaccgggac
gacgtcaacttcatgcgccacacgatggcctaccggtcggggccgctggtggccgcctcg
ccggaggcggagatccgcctggactacaagccggttgtcatgacccgctaccagccgatg
gagcgcaagtactga
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