KEGG   Frankia casuarinae: Francci3_3305
Entry
Francci3_3305     CDS       T00320                                 
Name
(GenBank) Type IV secretory pathway VirD4 components-like
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
fra  Frankia casuarinae
Pathway
fra03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fra00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Francci3_3305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fra02044]
    Francci3_3305
Enzymes [BR:fra01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Francci3_3305
Secretion system [BR:fra02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Francci3_3305
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ABD12662
RhizoBase: Francci3_3305
UniProt: Q2J7T0
LinkDB
Position
complement(3914294..3916366)
AA seq 690 aa
MSPRGEPGAGVMPDPALLLVGVAVLAGVGGVWAGAQTAALLFGAHEPLPVGLGAAVVAVP
RLVLRPGDPARAWPAEAAVLLPGPVGYWAGSVVPMAVAVLCGGVLFFLLQGRVGVARRRR
MGLDPEARFARLWEIAPMWVRRPVRGRMILGRARSGIVTRLLATEDASLPVDDAVPRLLH
RRVARRRGDRGAVLVVGPSRCGKTAALAVPAILEWDGPLIALSVKTDLLGATVRRRRALG
QVRVFDPTGVTGELSATWSPLAESTGLAGARLAARSIANSTDWTSSGSDMSFWTTAGEDL
LGLLFWVAATAGLGMDAVVGWTTSMDRDGVMRFAQAFARHDDPAIRVDGEQVLAGLSAVW
KTDPKQVSSVFLVARQMIRPWQEPSVQYSAAGSEIGLDWLLGDEPDDEPDTALDPFTDNN
PFTDGDPFTEDFGDAGQPGDGPRRRSNSVYLCADLDGAERLAPVLGGLVDDLIRSVYTRV
GVTGKPLDPPLLVVIDEAGNWPMKNLPGRISTCAGMGIQLMLVYQSKAQIDAAYGSKADV
IVSNAVTKVFFSGLSDKSTLDYAASLLGQEHVAARSLSSDIAPGGGRQGINDAPTRLELL
PAHLLRQVAPGQALLLHNTLPPVHLHGRYWFRDPALLALAAGEPPPARPAAQGVRPAAPR
EGFGRVVRAVRVVRVRGLWNRRHRSNGTGR
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtgagcccgcggggcgaaccgggcgcgggggtgatgcccgatcctgcgctgctgctcgtc
ggtgtcgcggtgctggcgggcgtgggcggggtgtgggcgggcgcgcagaccgccgcgttg
ctgttcggggcgcatgaaccgctgccggtcgggttgggcgcggcggtggtggcggtgccg
cgtctcgtcctgcgtccgggtgatccggcgcgggcctggccggcggaggccgcggtcctg
ctgccggggccggtgggctactgggccggaagcgtcgtgccgatggcggtcgcggtgctg
tgcggcggggtgctgttcttcctgctgcagggccgggtcggggtggctcgtcggcggcgg
atgggcctggatccggaggcgcggttcgcccggctgtgggagatcgccccgatgtgggtc
cgccggccggtccggggccggatgatcctcggtcgggcccggagcgggatcgttacccgg
ttgcttgcgaccgaggacgcgtccctgccggtggatgacgcggtgccgcggctgctgcac
cggcgggttgcccgccgccggggtgaccggggggcggtgctggtcgtcggtccgtcccgc
tgcgggaagaccgcggcgttggcggtgccggcgatcctggagtgggacggcccgctgatc
gccctgtcggtgaagacggacctgctgggcgcgaccgtgcgccggcgtcgggcgctcggg
caggtgcgggtcttcgaccctaccggtgtcaccggggaactgtcggcgacctggtcgccg
ctggcggagtccaccgggctggccggggcgcggctggccgcccggtcgatcgcgaacagc
accgactggacctcctccggatcggacatgagtttctggactaccgccggtgaggacctt
ctcggcctgctgttctgggtcgccgccaccgccgggctggggatggacgcggtggtcggt
tggacgacgagcatggaccgcgacggggtgatgcgtttcgcccaggccttcgcccgtcac
gatgacccggcgatccgggtggacggcgagcaggtgctggccggtctgagcgcggtgtgg
aagacggatcccaagcaggtctcgtcggtgttcctcgtggcccggcagatgatccggccg
tggcaggaaccgtcggtgcagtattccgcggccgggtcggagatcggcctggactggctg
ctcggtgacgagcccgacgacgagcccgacaccgccctcgacccgttcaccgacaacaac
ccgttcaccgacggcgatccgttcacggaggatttcggtgacgccgggcagccgggggac
gggccgcggcggcggtcgaacagcgtctatctgtgtgcggatctcgacggggccgaacgg
ttggcgccggtgctcgggggcctggtcgatgatctgatccgctcggtgtatacccgggtc
ggggtgacaggtaagccgttggacccgccactgctcgtcgtcatcgacgaggcggggaac
tggccgatgaagaatctgcccggccggatctccacctgcgcgggcatgggcatccagctg
atgctcgtctaccagagcaaggcgcagatcgacgcggcctacggcagcaaagccgacgtc
atcgtgtccaacgcggtcacgaaggtcttcttctccgggctgtcggacaagtcgaccctg
gactacgccgcctcgctgctcgggcaggagcatgtcgccgcgcgcagcctgtccagtgat
atcgcgccgggtggcggacggcagggtatcaacgacgcgccgaccaggctggaactcctc
ccggcgcatctgctgcgccaggtggcgccggggcaggcgttgctgctgcacaacacgctc
ccgcccgtgcacctgcatggacgctactggtttcgggacccggcgctgctcgccctcgcc
gccggggagccgcccccggcccggcccgcggcgcagggcgtgcggccggccgcgccccgt
gaggggtttggtcgggtggtgcgggcggttcgggtggtgcgcgtgcgcgggctgtggaac
cgccgacaccggtcgaacggaaccggccgatga

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