KEGG   Frankia casuarinae: Francci3_3507
Entry
Francci3_3507     CDS       T00320                                 
Name
(GenBank) Ribonucleoside diphosphate reductase, B12-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
fra  Frankia casuarinae
Pathway
fra00230  Purine metabolism
fra00240  Pyrimidine metabolism
fra01100  Metabolic pathways
fra01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:fra00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Francci3_3507
   00240 Pyrimidine metabolism
    Francci3_3507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fra03400]
    Francci3_3507
Enzymes [BR:fra01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Francci3_3507
DNA repair and recombination proteins [BR:fra03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Francci3_3507
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N LAGLIDADG_3 TSCPD Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ABD12860
UniProt: Q2J782
LinkDB
Position
complement(4188505..4192350)
AA seq 1281 aa
MTDSRGTKPSRSAAKASGLKIQRSRTTAGVHPYDEVTWESRDVVMTNWRDGSVNFEQRGV
EFPQFWSVNASNIVTSKYFRGAPGTPGREWSLRQLIDRVVHAYGAAGREHGYFASDTDAE
IFEHELTWMLLHQVFSFNSPVWFNVGTPAPQQVSACQPYDALVSTPSGLVPIGALVETDA
VGMKVFDAHGLTQVIATKSNGVKDVLRIWTRAGHALDVTADHLVWRSTSAGAGAFVPAGA
LRAGDTLEWHRTIAPGEGEITSREIAEAALAGRLQADGFVGRYAGTNASLTIEAMTVPTR
LYDAPLPVVAAYLRSLFQADGYVSRRERSTLIGLDMISEGLIRGVQGLLARFGIFARVRR
EADPRPDRHDLWSLGIQNAGDRRTFADEIGFLDPVKAAKLEASFDQPGQAAKPVKRLQIE
RIEPRGPMPVYDIQTDSGEYLSAGLRVHNCFILSVDDTMESILNWYREEGLIFKGGSGAG
LNLSRIRSSKELLSSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDHPDIVE
FVETKAREEDKIRALRDAGFDMDLGGRDIASVQYQNANNSVRVTDEFMRAVVDGGGFDLR
ARLDGRVLETVDARGLFHTIAEAAWACADPGIQYDGTINDWHTCPESGRISASNPCSEYV
HLDNSSCNLASLNLLKFLRPDRSFDAEAFVAAVELIITAMDISICFADFPTPEITRVSRA
YRQLGIGYANLGALLMASARAYDSDGGRALAASITSLMTATAYRRSAELAGIVGAYDGFA
RNADAHRRVMRKHAAANDAVRSVHAEDSRILAVASREWARAQTVGEKHGWRNAQASLLAP
TGTIGLAMDCDTTGIEPDLALVKMKKLVGGASMRIVNQTVPAALQALGYPEETIEAIVEY
IAEYGHVIDAPGLRPEHYEVFDCAIGERAISPMGHVRMMAAVQPFLSGAISKTVNMPSTA
TVAEVEQIYLEGWRLGLKALAIYRDNCKVGQPLTDVKGAKQAAELAATRTGTGVGVGTGD
AVGTAGSVGPAPVEVEYRPVRRRLPKTRPSRTVSFSVGGAEGYLTAGSYPDDGLGEVFIK
MSKQGSTLAGVMDAFAIAISIGLQYGVPLEAYVSKFINMRFEPAGMTDDPDVRIAQSIMD
YLFRRLALDYLDADQRAELGISTAADRARRVAGQYGPAPAVEAARSAQPAGIDGPAGSQG
AAVTGSSASVADRGDPGVPPGPAVGNGPAYVARELRLAPPGESLVAQTVVDAPLCFTCGV
TMRPAGSCYVCEQCGSTSGCS
NT seq 3846 nt   +upstreamnt  +downstreamnt
atgaccgacagccgcggcacgaagccgagcaggtcagcggcgaaagcgagtgggttgaag
atccagcggtcacgtaccaccgccggcgtccacccgtacgacgaggtcacctgggagtcc
cgggacgtcgtcatgaccaactggcgggacggctcggtcaacttcgagcagcggggagtg
gaattcccgcagttctggtcggtgaacgcctccaacatcgttaccagcaagtacttccgt
ggggcgcccggcacgccggggcgggagtggtcgctgcggcagttgatcgatcgggtcgtg
cacgcctacggcgcggccggccgcgagcacggctacttcgcctcggacaccgacgccgag
atcttcgagcacgaactgacctggatgctgctccaccaggtcttcagcttcaactcgccg
gtctggttcaacgtgggaacccccgcgccgcagcaggtctcggcgtgccagccctatgac
gccctcgtcagcacgccatccggtctggttcccatcggcgccttggtggagacggacgcg
gtggggatgaaggtcttcgacgcgcacggtctgacccaggtgatcgcgaccaagtccaac
ggcgtcaaggacgtcctgcggatctggacgagggccggtcacgcgctcgacgtcaccgcc
gatcatctggtgtggcggagcacctccgcgggtgccggggccttcgtccccgccggcgcg
ctgcgggccggggacaccctcgagtggcatcgcaccatcgccccgggcgagggtgagatc
acttcacgggagatcgccgaggcggcgctcgcgggccggctgcaggcggacggttttgtt
ggtcggtacgccggtacgaacgcctcgctgaccatcgaggcgatgactgtgccgacccgg
ctgtatgatgctccgctacccgttgtcgcggcttatctgcgcagcctgttccaggccgat
ggctacgtgtcccgccgggagcgctcgacgctgatcgggctggacatgatcagcgagggc
ctcattcgcggggtgcagggtttgctcgcccggttcggcatcttcgcgcgggtacgccgc
gaggcggatccgcgacccgaccgccacgacctctggagcctgggcattcagaacgccggt
gaccggcggacgttcgcggacgagatcggcttcctcgatccggtgaaggccgcgaagctg
gaggcgtcgttcgatcagcccggccaggccgcgaagccggtgaagcggttgcagatcgag
cgcattgagccgcgcgggccgatgccggtctacgacatccagaccgacagcggcgagtac
ctctccgccggcctccgtgtgcacaactgcttcatcctctccgtggacgacaccatggag
tcgatcctgaactggtaccgggaagaggggctgatcttcaaggggggttccggggccggg
ctcaacctgtcccgcatccggtcctcgaaggagctgctgtcctccgggggcaccgcctcc
gggccggtgagcttcatgcgcggcgccgacgcctcggcgggtacgatcaagtccggtggc
gcgacccggcgggcggcgaagatggtcgtgctcgacgtcgatcatcccgacatcgtcgag
ttcgtggagacgaaggcccgggaagaagacaagatccgggcgttgcgggacgccggcttc
gacatggacctcggcgggcgcgacatcgcctccgtgcaataccagaacgccaacaactcc
gtccgggtgaccgacgagttcatgcgggcggtcgtcgacggcggcggcttcgacctgcgg
gcccgcctcgacggccgtgtcctggagacggtggacgcccgcgggctgttccacacgatc
gccgaggccgcgtgggcctgcgccgatcccggcatccagtacgacggaacgatcaacgac
tggcacacctgccccgagagcggccggatcagcgcctccaacccgtgcagcgagtacgtg
cacctggacaactccagctgcaacctggcctcgctgaacctgctgaagttcctgcgcccg
gaccgcagcttcgacgccgaggcgttcgtcgcggcggtcgagttgatcattaccgcgatg
gacatctcgatctgcttcgccgacttcccgacgccggagatcaccagggtcagccgggcc
taccggcagctcggcatcggctacgccaacctcggtgccctgctgatggccagcgcccgg
gcctacgactcggacggcggccgggcgctggccgcatcgatcacctcgctgatgacggcc
accgcctaccggcgctccgccgaactcgccgggatcgtcggcgcctacgacggcttcgcc
cgcaacgcggacgcgcaccggcgggtgatgcgcaagcatgccgccgcgaacgacgcggtg
cgcagcgtgcacgccgaggactcccggatcctcgccgtcgcgtcccgggaatgggcccgg
gcgcagaccgtcggcgagaagcacggatggcgcaacgcgcaggccagcctgctcgccccg
acgggcacgatcggtctggcgatggactgcgacaccaccggcatcgagccggacctcgcc
ctggtgaagatgaagaagctggtcggcggcgccagcatgaggatcgtgaaccagacggtc
ccggcggccctgcaggcgctcggctaccccgaggagaccatcgaggcgatcgtcgagtac
atcgccgagtacgggcacgtcatcgacgctcccggcctgcgtccggagcactacgaggtg
ttcgactgcgccatcggggagcgcgcgatctccccgatgggccatgtccgcatgatggcc
gcggtacagccgttcctctccggcgcgatctcgaagacggtgaacatgccgtcgaccgcc
acggtcgccgaggtcgagcagatctacctggaggggtggcggctgggcctgaaggccctc
gccatctaccgggacaactgcaaggtcggccagccgctgaccgacgtcaagggggcgaag
caggccgccgagctggccgccacccggaccggcacgggagtcggggtcggcacgggagac
gcggtcgggaccgccggctccgtcggacccgccccggtggaggtcgagtaccgaccggtg
cgccgccggctgccgaagacccgcccgtcgcggacggtgtccttctccgtcggcggggcc
gagggttatctgaccgccggttcctacccggacgacggtctcggtgaggtcttcatcaag
atgtcgaagcaggggtccaccctggcgggcgtgatggacgcgttcgcgatcgccatctcg
atcggcctgcagtacggcgtgccgctggaggcgtacgtcagcaagttcatcaacatgcgg
ttcgagccggctgggatgaccgacgacccggacgtgcggatcgcccagtcaatcatggat
tatctgttccgtcgcctcgcgctcgactatctcgacgccgatcagcgggccgaactcggc
atctcgaccgcggccgaccgggcccgtcgggtcgcgggtcagtacggtccagcgccggcg
gtggaggccgcgcgatcggcgcagcccgccgggatcgacggcccggccggatcccagggg
gccgcggtgaccggatcctcggcttccgtcgccgatcggggtgacccgggcgtcccgccc
ggtccggcggtagggaacggcccggcgtacgtggcacgggagttgcggctggcaccgccc
ggcgagtcgctcgtcgcgcagaccgtggtcgatgctccgctctgcttcacctgcggggtg
accatgcggccagctggtagctgctacgtctgtgagcagtgcggttcgaccagcggctgc
agctag

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