Frankia casuarinae: Francci3_3800
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Entry
Francci3_3800 CDS
T00320
Name
(GenBank) UvrD/REP helicase
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABD13150
UniProt:
Q2J6E2
LinkDB
All DBs
Position
complement(4555907..4559218)
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AA seq
1103 aa
AA seq
DB search
MVVLPAPAPRPGYRLIAAPVAPPRPLVLDAAQRAVVEHGGGPLLVLAGPGTGKTATLVEA
VAARIEAGADPRSILVLTFSRRAAGELRERITARLGAEGGAGGGPGAWTFHAWCLALLRA
HERPAPPGGLRLLSGPEQDSRLRDLIEGSREDGRPVWPEPLVGCLRTRGFTEEVRALLAR
AREVGLEPVALAQLARRTGRPDWAALAEFYEMYLDVFGFEGAVDYTDLVHRAVVVAESAE
GGAWLRGRYRHVFVDEYQDTDPAQERLLEAVAGGGGNLVVLGDPDQSIYAFRGAEVAGLL
GFPARFPRLDGEPAPIVALRRCRRMAPAPLAASRHVARRIPAAGLPVAAIRAHRDLVGRA
DAGAGQVQARTFPGTGAEAESVADLLRREHLENGVAWDAMAVLVRTAERIGRLRRVLAAA
GVPVSADGDDLPVAQEPAAALLLLALRCAEDPAGALTVDAARTLLTSPLGGADPAGLRAL
GRALRTLERDAGSEHPAPSAELLRAAVAEPDHWLATIPDDLAGPVRRVGGLLRTAGQALR
DSSGAPQDALWALWSASEWPARLRHASAAGGAAGRAADRDLDAVVALFDAVTRLGQRRGP
GGGVASLVAELTRQQIAGDVLKPAGESVRRRGVRLLTAHRAKGLEWEVVVVCGVQDGTWP
DLRERHSLLGAEQLDAPSRGGLRPPLTRQDLLADERRLFYVALTRARRRLVVTAVNSPED
DGSLPSRFLEELGVAVEHVPGRPARPLTLVGLVATLRRLATEPDSSPVMRSAAQARLAAL
AAARDQAGRPLVPAAHPDTWWGLLDPTTSDVPVVPVAGPIRLSGSSLSSIGACSLRWFLE
HEAYAVTPASTAQGFGKVVHALADEVTTGRTPADLAALDARLDTVWRQLDFDARWRSDQE
RAAAREALARFLDWHAAERGRRVIDAEVRFSCDLRVAGRDVQLRGFIDRLELDEAGRVHV
IDFKTGRTAVAPAELATHPQLGSYQLAVRAGALDDVLAAAAPDQPGADQPRAVPGGAELV
QLRRDAGAAAAGPRLPGERPGPPEVQAQSALPPHGATWMDEVLDAAVRTIDAEAFRPTPG
DHCTLCTFQTSCPARPEGRQVVE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgtccttcctgcccccgccccgcgtcccggctaccggctgatcgcagccccggtc
gcgccgccgcgtccgctcgtcctggatgcggcgcagcgcgcggtggtcgagcacggcggc
gggccgctgctggtgctcgccgggcccggcaccgggaagacggccacgctcgtcgaggcg
gtcgccgcgcggatcgaagccggggcggatccgcggtcgatcctggtcctcaccttcagc
cggcgagccgccggagagctgcgggagcggatcaccgcacggctcggtgccgagggcggg
gccggcggaggtcccggggcgtggacgttccacgcctggtgcctggcgctgctgcgcgcg
cacgagcggccggccccgccgggcgggctccggctgctgtccggcccggagcaggacagt
cggctgcgcgatctcatcgagggttcccgcgaggacggccggccggtctggcccgagccg
ctcgtgggttgcctgcgcacccgcggtttcaccgaggaggtgcgggcgctgctggcccgc
gcccgcgaggtcgggctcgaaccggtcgcgctggcgcagctcgctcggcgtaccggccgc
ccggactgggccgccctcgccgagttctacgagatgtacctcgacgtgttcggattcgag
ggggcggtcgactacaccgatctcgtccaccgggccgtggtcgtcgccgagagtgccgag
gggggcgcctggctgcgtgggcgctaccggcacgtcttcgtcgacgagtaccaggacacc
gatccggctcaggaacgcctgctggaggcggtggccggtggtggtggcaacctcgtcgtg
ctgggcgacccggaccagtcgatctatgccttccggggggccgaggtcgccggcctgctg
ggcttcccggcccggttcccccgcctcgacggcgagccggcgccgatcgtcgcgctgcgg
cgctgtcggcggatggccccggccccgctggcggcgagccggcacgtggcccggcggatc
ccggccgccgggcttccggtggccgcgatccgggcacaccgcgacctcgtcgggcgcgcc
gacgccggggcgggccaggtgcaggcccgcacgtttccgggcaccggcgcggaggccgag
tcggtggccgacctgctccgtcgcgaacatctggagaacggcgtcgcctgggacgcgatg
gcggtcctggtccgcacggccgagcggatcggccggttgcgccgcgtgctggccgccgcc
ggcgttccggtcagcgccgacggtgacgacctgccggtcgcccaggagccggccgccgcc
ctgctcctgctggcgctgcgctgcgcggaggatccggccggggcgctcaccgtcgacgcg
gcgcgcaccctgctcacctcgccgctcggtggagcggacccggccgggctgcgggcgctg
ggccgggctctgcgcaccctcgagcgcgacgcggggtccgagcatccggcgccgtcggcg
gagctgttgcgggcggcggtcgccgagcccgaccactggctggcgacgatccccgacgac
ctggccggtccggtccggcgggtcggcggtctgctgcggacggccggtcaggcgttgcgg
gactcctcgggcgccccgcaggacgctctgtgggcgctgtggtcggcgagcgagtggccg
gcgcggctgcgacatgcctcggcggccgggggcgccgccgggcgcgcggccgaccgtgac
ctcgacgccgtcgtggcgctcttcgatgccgtcacccggctgggccagcggcgtgggccg
ggcggtggcgtcgcgtccctggtcgcggagctcacccgccagcagatcgccggggacgtc
ctcaagccggccggggagtccgtgcgccgccgcggggtgcggctgctgaccgcccatcgc
gccaaggggctcgaatgggaggtcgtcgtcgtctgcggagtgcaggacggcacctggccc
gacctgcgggagcggcattcgctgctcggtgcggagcagctcgacgcgccgtcccggggc
gggttgcgcccgccgctgacccgccaggacctgctcgccgatgaacgtcggctgttctac
gtcgccctgaccagggcgcggcgccggctggtcgtcaccgcggtgaacagccccgaggac
gacggcagcctgccgagccgcttccttgaggaactgggtgtagcggtggagcacgtgccc
ggtcgcccagcccggccgctcaccctggtcggcctggtcgcgaccctgcgccggctggcg
acggaaccggactcaagcccggtgatgcgctccgccgcgcaggcccgcctcgccgcgctc
gccgccgcacgggaccaggcgggccggcccctggtgccggccgcgcacccggacacctgg
tgggggctgctcgaccccaccacgtcggatgttcctgttgtcccggtggccgggccgatc
cggctgtccggctcgtcgctgtcgagcatcggcgcctgttccctgcggtggttcctagag
cacgaggcgtacgcggtcaccccggcctcgaccgcgcagggattcggcaaggtggtgcac
gccctggcggacgaggtcacgaccgggcggaccccggccgacctcgccgcgctcgacgcc
cggctggacacggtgtggcggcagttggacttcgacgcccgctggcgctccgatcaggag
cgcgcggccgcccgcgaggcgctcgcccgcttcctggactggcacgccgccgagcgcggt
cggcgcgtgatcgacgcggaggtcaggttctcctgcgacctacgggtcgccgggcgggac
gtccagctgcgcggattcatcgaccggctcgaactggacgaggccggccgggtccacgtc
atagacttcaagaccggtcggaccgcggtcgctcccgccgagctcgccacccacccccag
ttgggcagctatcagctcgccgtgcgggccggcgcgctcgacgatgtgctcgcggccgcg
gcgccggatcagcccggggcggatcagccccgggcggtgcccggcggggcggagctcgtg
cagctccggcgggatgccggcgctgcggcggccggtccgcggctgccgggggagcggcct
ggcccgccggaggtccaggcccagagcgcgctgcctccccacggcgcgacctggatggac
gaggtgctcgacgcggcggtgcgcaccatcgacgccgaggcgttccggccgacgcccggc
gaccactgcacgctgtgcaccttccagacgagctgccccgcgcggcccgagggacgtcag
gtggtcgagtga
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