Francisella sp. FSC1006: LO80_03740
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Entry
LO80_03740 CDS
T03403
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
frf
Francisella sp. FSC1006
Pathway
frf03410
Base excision repair
frf03430
Mismatch repair
frf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LO80_03740
03430 Mismatch repair
LO80_03740
03440 Homologous recombination
LO80_03740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frf03400
]
LO80_03740
DNA repair and recombination proteins [BR:
frf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LO80_03740
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LO80_03740
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LO80_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIT09168
UniProt:
A0A097ENM6
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Position
complement(744503..746251)
Genome browser
AA seq
582 aa
AA seq
DB search
MLIKKRKINQEVLNELVSKGHDFFIAKIVAARVNQGVDTDLIFKSSIKDLSSPFLFKDID
KAVDRLYQALQNGEVIGLETDHDCDGQTSHAIFYEALTKVFGYPKDKVRSYIGHRMQEGY
GLSESLMNRILTDNMRPSLIITADNGSTDEVRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
VAVLNPTQDGCDYPDKAIAGCMVAWLFMAALRRKYIQNNKPVSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKFGIQQLKENNRLCWDFIDKDKLSSEYIGFSIAPILNSDGRVSD
ALGSVSFLLEENDEKIEEIFDNLKEQNNQRKEIQKTLTQEAMLQAQQLNETKKSLCILLE
NGHSGIHGISASRLKESFGKPIIIFSQTQTDETLISGSARSVDEIHIKQVLDNVAVKEPN
LMIKYGGHKGAAGLTIKKQDFDKFYELFESQVIELVNQENIVLEPCIEYDFELDEQYFNL
DTLTKIDSLEPYGREFEKPVFCNEFTIENFRLVGKDKNHAQLVLRYKNSSIKGIWFNATD
NIIANQLNIGDSVKVCYQLQKEEFLGQVNLSLNVKAIQYEES
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaaaaaaagaaaaataaatcaagaagttttaaatgagctagtctcaaaggga
catgacttttttattgctaaaatagtagctgctagagtaaatcaaggcgtagatactgat
ttgatttttaagagttctataaaagatctttcatcgccatttttatttaaagatattgat
aaagctgtagataggctttatcaagctttgcaaaatggtgaggtaattggtttagaaaca
gatcacgactgtgatggtcaaacttctcatgcaattttttatgaagctttaacaaaagtt
tttggttacccaaaggataaagttcgttcatatattggacatagaatgcaagaaggttat
gggctgtcagaatccttgatgaatagaattctcacagacaatatgcgaccaagtttgatt
ataaccgcggataatggctccacagatgaagtaagaattgctgtacttaagcaaaatgga
attgatacgattgttacggatcatcatggcataccgccagaaggtgcaccaaagagtgcg
gtagctgtgcttaatccaactcaggatggttgtgattatccagataaagcaattgctggc
tgtatggttgcttggttatttatggcagctttacgtaggaagtatattcaaaataataag
cctgtatccaaatcgtatggtttgagtaatctattagattttgtcgcaattggtacggtt
gctgattgtgtaagtatggcaaatagtcataataatcgcattgtgacaaaatttggtatt
cagcaactcaaagaaaataatcgcctatgttgggatttcatagataaagacaaactttct
agtgagtatattggatttagcattgcaccaattttaaatagtgatggtagagtttctgat
gctttggggtcagttagttttctacttgaagaaaatgatgaaaaaatagaagaaatattt
gataatcttaaagagcagaacaaccaacgcaaagaaatacaaaaaactttaactcaagaa
gcaatgcttcaagcacaacagttaaatgaaactaaaaaatcgctatgtatattactagaa
aatggtcactctggaattcatggaatctcagcgagcaggcttaaagaaagttttggcaag
ccaataattattttctcacaaactcaaactgatgagactcttatctcagggtctgcaaga
agtgttgatgagatacatatcaagcaagtattagataatgttgctgtaaaagagcctaat
ttgatgatcaaatatggtggacataaaggcgcagcaggcctcacaatcaaaaagcaggat
tttgataagttttatgagctttttgaaagtcaggtaatcgagttagtgaatcaggaaaac
atagttttagagccatgtattgagtatgattttgagcttgatgagcagtattttaattta
gacactcttacaaaaattgattctctagagccttatggtcgtgagtttgaaaaacctgtt
ttttgcaatgagtttacaattgagaattttcgcctagttggtaaagataaaaatcatgct
caactagttttacgctataagaatagttcaatcaaagggatctggtttaatgctacagat
aacataatagcaaatcagctaaatattggtgatagtgtgaaagtttgttatcagttacaa
aaagaagagttccttggccaagttaatttgtcattgaatgttaaagcaatccaatatgaa
gaatcataa
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