Pseudofrankia inefficax: FraEuI1c_2971
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Entry
FraEuI1c_2971 CDS
T01354
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FraEuI1c_2971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_2971
Enzymes [BR:
fri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FraEuI1c_2971
DNA repair and recombination proteins [BR:
fri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FraEuI1c_2971
Prokaryotic type
FraEuI1c_2971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADP80996
UniProt:
E3JAE5
LinkDB
All DBs
Position
3591004..3591681
Genome browser
AA seq
225 aa
AA seq
DB search
MSGQPLRELVEPGWADALEPVAERVAAMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDEV
RVLIVGQDPYPTPGMAIGLSFAVAPDIRRLPGSLVNIFQELRADVGVQEPSNGDLSAWTG
QGVLLLNRALTTAPRQPGSHRGKGWEEITEQAIRALAGRGKPLVAILWGADARGLRPFLA
GIPTIESAHPSPRSADRGFFGSRPFSRANDLLLSQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggacaaccgttgcgggagctggtcgagcccggctgggccgacgcgctggagccg
gtcgccgagcgggtcgcggccatgggcgacttcctgcgcgccgagatcgcggccgggcgt
acctacctgccggccgggccgaacgtgctgcgcgccttccagcagccgttcgacgaggtg
cgggtgctgatcgtcgggcaggacccgtacccgacgcccggcatggccatcggcctcagc
ttcgcggtcgcgcccgacatccggcgcctcccgggcagcctggtcaacatcttccaggag
ctgcgcgccgacgtcggcgtgcaggagccgtcgaacggtgacctgtcggcgtggaccggc
cagggcgtgctcctgctgaacagggcgctgacgacggcaccccgccagcccggctcgcac
cggggcaagggctgggaggagatcaccgagcaggcgatccgggcgctggccgggcgcggc
aaaccgctggtggcgatcctgtggggcgcggacgcgcgcggcctgcgcccgttcctggcg
ggcatcccgacgatcgagtcggcccacccgtcgccccgctcggcggaccgtggcttcttc
ggctcccgaccgttcagccgggcgaacgacctgctgctgagccagggcgcccagcccgtc
gactggcgcctgccctga
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