Frigoribacterium sp. NBH87: F1C15_11115
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Entry
F1C15_11115 CDS
T06748
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1C15_11115 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frn03019
]
F1C15_11115 (recQ)
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_11115 (recQ)
Enzymes [BR:
frn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C15_11115 (recQ)
Messenger RNA biogenesis [BR:
frn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1C15_11115 (recQ)
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1C15_11115 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QNE44286
UniProt:
A0A7G6Z0M1
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All DBs
Position
2388477..2390678
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AA seq
733 aa
AA seq
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MTDAPPSSAAPATGSPTDASGSATDASARAGSPVEVLQRVFGYDAFRGDQAAIIDQVVGG
GDALVLMPTGGGKSLCYQVPALVRPGTGVVVSPLIALMQDQVDALEAVGVRASFLNSTQD
PDQRRAVEQAFVTGELDMLYLAPERLKLDSTKSLLDRGRVSLFAIDEAHCVAQWGHDFRP
DYLELSVLHERWPDVPRIALTATATETTHREISRRLELDDAAHFVADFDRPNIQYRIEAK
DGPQQQLLRFIRAEHDGDAGIVYCLSRKSVESTAEFLVKQGIAALPYHAGLDAGTRARNQ
SRFLREDGIVMVATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLA
YGLQDVMQQRRMIDQSEGDAEHRRKLSAHLDAMLALCETVECRRVQLLGYFGQASTPCHN
CDTCLNPPQSLDGTVPAQKLLSTIVRLKRERDQQFGAGQIIDILLGKTTPRITQNRHEQL
STFGIGTELSEIEWRGVVRQLLAQGVLAVSPDGYGTLLITDAAAEVLSGSRPVRLRKEPE
RAPRSRSARGAGGSSRGSRTGAGAADLDAADVPLFETLRQWRAGVAKAQGVPAYVVFGDV
TLRGVAAARPSSMTELAGISGVGQKKLDTYGQQVLDVVAGVSPEEAAAAAAERGPASSGP
SFGGGGGGVDDEARPATAPGSARRAAPARSRPATRPTTTAPASGGAPDLEPYPYDDEPPF
DPYVDDVPPDDWR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgctcccccctcctccgcagcccccgccaccggcagcccgaccgacgcctcc
ggcagcgcgaccgacgcctccgcgcgggccggctcgcccgtcgaggtgctgcagcgggtc
ttcggctacgacgccttccgcggcgaccaggcggcgatcatcgaccaggtcgtcggcggc
ggcgacgccctcgtgctgatgccgaccggcggcggcaagtcgctctgttaccaggtgccc
gcgctcgtgcgccccggcaccggggtcgtcgtctcgccgctgatcgcgctgatgcaagac
caggtcgacgccctcgaggccgtgggcgtgcgggcgtcgttcctcaacagcacgcaagac
cccgaccagcgccgtgccgtcgagcaggccttcgtcacgggcgagctcgacatgctctac
ctcgcgcccgagcggctgaagctcgacagcaccaagtcgctgctcgaccgcggccgggtc
tcgctcttcgcgatcgacgaggcgcactgcgtcgcgcagtggggccacgacttccgcccc
gactacctcgagctgtcggtgctccacgagcgctggcccgacgtgccgcgcatcgccctc
accgcgaccgccaccgagaccacccaccgcgagatctcgcggcggctcgagctcgacgac
gccgcgcacttcgtggccgacttcgaccgccccaacatccagtaccgcatcgaggcgaaa
gacggtccgcagcagcagctgctccgcttcatccgcgccgagcacgacggcgacgccggc
atcgtctactgcctctcgcgcaagtcggtcgagagcaccgccgagttcctggtgaagcag
ggcatcgccgcgctgccctaccacgcgggcctcgacgcgggcacgcgtgcccgcaaccag
tcgcgcttcctccgtgaagacggcatcgtgatggtcgccacgatcgccttcggcatgggc
atcgacaagcccgacgtccgcttcgtcgcccacctcgacctgcccaagtcggtcgagggc
tactaccaggagaccgggcgggccgggcgagacggtctgccgtcgaccgcgtggctggcc
tacggcctgcaggacgtcatgcagcagcgccgcatgatcgaccagtcggagggcgacgcc
gagcaccgccgcaagctcagcgcgcacctcgacgcgatgctcgcgctctgcgagacggtc
gagtgccgccgcgtgcagctgctcggctacttcggccaggcgagcaccccgtgccacaac
tgcgacacctgcctgaacccgccgcagtcgctcgacggcaccgtgccggcgcagaagctc
ctgtcgacgatcgtgcgcctcaagcgcgagcgcgaccagcagttcggcgcgggccagatc
atcgacatcctgctcggcaagacgacgccgcgcatcacgcagaaccgccacgagcagctc
agcacgttcggcatcggcaccgagctgagcgagatcgagtggcggggcgtcgtgcgccag
ctgctcgcccagggcgtgctggccgtctcgcccgacggctacggcaccctgctcatcacc
gacgccgcggccgaggtgctctcgggctcgcggcccgtccgtctccgcaaggagcccgag
cgggccccccgatcgcgctcggcccgcggggcgggcggctcgtcgcgcggctcgcgcacc
ggtgccggcgccgccgacctcgacgccgccgacgtgccgctgttcgagacgctgcgccag
tggcgggccggggtcgcgaaggcccagggcgtgcccgcctacgtcgtcttcggcgacgtc
accctgcgcggcgtcgccgcggcccggccctcgtcgatgaccgagctcgccggcatcagc
ggcgtcgggcagaagaagctcgacacctacggccagcaggtgctcgacgtcgtggccggc
gtctcgcccgaggaggccgccgccgcggcggccgagcgcggcccggcgagctccggcccg
agcttcggcgggggagggggcggggtcgacgacgaggctcgccccgccacagcgcccggg
tcggcccgccgggccgcgcccgcccggtcacgaccggcgacgcgccccacgacgacggcc
ccggccagcgggggcgcccccgacctcgagccgtacccgtacgacgacgagccgcccttc
gacccctacgtcgacgacgtcccgcccgacgactggcgctga
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