Fervidobacterium riparium: IB67_00495
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Entry
IB67_00495 CDS
T08552
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
frr
Fervidobacterium riparium
Brite
KEGG Orthology (KO) [BR:
frr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frr03016
]
IB67_00495
03036 Chromosome and associated proteins [BR:
frr03036
]
IB67_00495
Transfer RNA biogenesis [BR:
frr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
IB67_00495
Prokaryotic type
IB67_00495
Chromosome and associated proteins [BR:
frr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
IB67_00495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Pyr_redox
Dip
Pyr_redox_3
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UXF00112
LinkDB
All DBs
Position
complement(103987..105834)
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AA seq
615 aa
AA seq
DB search
MFDVIVVGGGHAGIEASLACARLGLKTMLITGNPDNVGWASCNPAIGGSAKGVVVREIDA
LGGEMAKTTDETMINVRMLNTSKGPAVQALRAQIDKYSYSRTMKRKLEMQDNLLLRYGIV
KELLVEDGKVSGIVDSFGIDYRARAVILTTGTFLRGKIFIGRDTMEAGRMGDFSAHGLTE
SLIKLGFTVGRFKTGTPARVLKKSIDFSKMTRQDTDDVPWVFSHFNEPKVLDKDYPCWLT
HTVPETHKIIRDYLIFSPLYGEVKLIQAKGPRYCPSIEDKVVKFDRESHQVFVEPEGRDT
EEYYLNGLSTSLPYAAQIKMLRTIPGLENVVIVRPAYAVEYDYIDPTQLYPTLESKIIEN
LYFAGQINGTSGYEEAAAQGLVAGINAAMKLLGGQQIVLKRSESYIGVMIDDLVTKGTDE
PYRLLSSRAEYRLLLRHDNAHMRLSKYGYQVGLIPKWFYERVVNLENEIQKQLERLENVK
VPLSTQVNDILTRLGTTPLTEGTRLAKLLRRPEVSYEAIKELDPEPILDKEIISQIEIQL
KYEGYIKSMLDQVRVFEEYENLQIGNIKFTDVPNLSTEAREKLEKIRPLSIGQAMRIAGV
TPADILALLTYIKKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgttatagttgttggcggtggtcatgctggtatagaagcttcacttgcatgt
gctcgacttggcttgaaaacaatgcttataaccggaaaccctgataatgttggttgggcc
tcctgcaatccggcaataggtggctcagctaaaggcgttgttgtgcgtgaaatagatgca
ctcggtggtgagatggcgaagacaacagatgaaacgatgataaacgtaaggatgctcaac
accagcaaagggccggctgttcaggcacttcgtgcgcagattgacaaatattcttactca
cgaacaatgaaaagaaagctcgaaatgcaggacaacttgttgctaagatatggaattgtg
aaagaactgcttgtggaagatggtaaggtttcgggtatcgtcgactcttttggtatcgat
tacagagcgagagctgttatcctgacaacaggaacgttccttagaggaaagattttcatc
ggcagagatacgatggaagcaggacgtatgggtgatttctcagctcacgggcttaccgaa
tcactcatcaaattgggcttcacagttggacgatttaaaacagggacgccagcacgtgtt
cttaagaagagcatagacttttctaaaatgacaaggcaagacacggacgatgttccttgg
gtgttttctcatttcaacgagccaaaagtattggacaaagactacccttgctggttgaca
cataccgtgccggaaactcacaagataataagagactacctgattttctcaccactttac
ggagaggtcaagttgattcaagcgaagggacctcgttattgcccttctattgaagacaaa
gttgtgaaatttgatagggaaagccaccaagtttttgtcgaaccagagggtagggatacg
gaagagtactatctcaacggcctatcgacaagtcttccatacgcggcgcaaataaagatg
ctcaggacgattccgggtttggagaacgttgtgattgttagaccagcgtatgctgtggaa
tacgactatatagaccccacacaactttatccaaccttagagtcgaaaattattgaaaac
ctctactttgcaggacaaataaacggaacgagcggatacgaagaagcggctgcccaagga
ttagttgcgggcataaacgcggcgatgaaattgttaggtgggcaacaaattgttttgaaa
agatcagaaagttatatcggtgtcatgatcgatgatcttgtaacgaaaggaacagacgaa
ccatacagattgctatcttctcgtgcagagtacaggcttttgctgaggcacgacaacgca
cacatgaggttgtctaagtacggataccaagtagggttgattccgaagtggttctacgaa
cgtgttgtgaatttggaaaatgaaatccaaaaacagcttgaaagattagagaacgttaag
gttccattatctacgcaagtcaatgatatattgacaagacttggaaccacaccattaacc
gaaggcacaagattggcaaaactgcttagaagaccagaagtgagctatgaggctataaaa
gagcttgatccagaacctattcttgacaaagaaattataagccagatagaaattcagctc
aagtatgaaggctacataaagtcgatgcttgatcaagttcgagtctttgaggaatacgaa
aatttacaaattggcaacataaaatttacagatgtgccgaatttatcaactgaagcgcgt
gaaaagcttgaaaaaataagacctttgtcaattgggcaggctatgcggatagccggtgtt
acgcctgcagatattttggctttattgacctatatcaagaaaaaatga
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