KEGG   Francisella uliginis: F7310_04065
Entry
F7310_04065       CDS       T05017                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
frx  Francisella uliginis
Pathway
frx02024  Quorum sensing
frx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:frx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F7310_04065
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F7310_04065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:frx03019]
    F7310_04065
   03036 Chromosome and associated proteins [BR:frx03036]
    F7310_04065
Messenger RNA biogenesis [BR:frx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     F7310_04065
Chromosome and associated proteins [BR:frx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    F7310_04065
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Carmo_coat_C
Other DBs
NCBI-ProteinID: API86581
UniProt: A0A1L4BRW8
LinkDB
Position
834918..835247
AA seq 109 aa
MSRISSLQDPFLNALRKEKVSVSVYLVNGIKLQGQVEAFDQFCIVLRNTVNQMVYKHAIS
TIVPAKSVRMVYSSFNPYHQNSNEEQDENVADVHSDELEAQENEGNTNE
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtcaagaatatcatctttacaagacccattcttaaatgctttaagaaaagaaaaagtt
agcgtatctgtttatcttgtaaacggtattaaattacaaggtcaagtagaagcttttgac
cagttctgtatcgtacttagaaatactgtaaatcaaatggtttataagcatgctatttct
actatagtacctgctaaaagtgtaagaatggtttatagctcttttaacccatatcatcaa
aactcaaatgaagagcaagatgaaaatgttgctgatgttcactctgatgaacttgaagct
caagagaacgaaggcaatactaacgaataa

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