Fibrobacter succinogenes: Fisuc_1271
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Entry
Fisuc_1271 CDS
T01099
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fisuc_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsu03021
]
Fisuc_1271
03400 DNA repair and recombination proteins [BR:
fsu03400
]
Fisuc_1271
Enzymes [BR:
fsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fisuc_1271
Transcription machinery [BR:
fsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fisuc_1271
DNA repair and recombination proteins [BR:
fsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fisuc_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RMD1-3
Motif
Other DBs
NCBI-ProteinID:
ACX74871
UniProt:
C9RQN5
LinkDB
All DBs
Position
complement(1572253..1576542)
Genome browser
AA seq
1429 aa
AA seq
DB search
MTTERKSYSSNKFHLELPYLIEVQKASYEQFLQKDIPQEKRMNVGLERVFRDIFPITDDK
DLYSLKYEGYYFGIPKYSIPECRERGLTYSMELFATLSLQVFEKDGEESKLKEEIKNDVL
VCDLPIMTENGTFIINGAERVVVSQLHRSPGVSFDEEMQPNGRSDYKSRIIPHRGAWVEF
NTEGDILYLIIDRKKKIAATAMLRCIGFETTQDILNLFYKKTDEIVLDDAAFNDFDKEGV
CTLINRIIFNDVVDEETGEIILEANTVIDDKKLERLRESSVEKITVLSKEEDNLLIHYTL
AADKTKSREDALKAVYSVTHQQQEEAPNLQTAERYFDELFLNDPHKYDLGEVGRYRLNAK
VYTAAILAKVKEVAERFDRVNEFKMPSVTQMTMSKTDFLAIIEYMVGLFNGDEGYTLDDI
DHLGNRRTRSVGELLAGQISVGLSRMSRVIRENLSLHSEEEQTTPRELVNTRMVSTVVQA
FFGQSQLSQFMDQMNPLSELTHKRRLSALGPGGLTRERAGFEVRDVHYTHYGRLCPIETP
EGPNIGLINSLASYAVVNHFGFIETPYRIVGLVEFKDAQGNKCYFPEEKWHFGIFKGFVH
DPHLFVELELTQKEIDTVRLNLDNRQRELFEGFVNKVFQLKDADGNVSYSKNGFALDDFD
GTPDYVQVGDVVEQIVSDYISYLTADEEDSFKVAPASTELDENNRFKGDMDGYVIVRDKS
EYPHLMKQDSIAIGDTETERIDLMDVAPMQIVSVAAGLIPFLEHDDANRALMGSNMQRQA
VPLLRAEAPVVGTGLERRAALDSGTVVRAKHDGKVTFVDARNITVQRGKMVNGVFEPLTG
LGENYEFLGKDPIDEYTLRKFERSNQDSCINQKPIVNVGDFVEVGDVLADGVSTDHGELA
LGKNILIGFLPWNGYNYEDAVIISEELAIKDTFTSIHIEEYEMEVRDTKRGPEELTREIP
NVGEDALRNLDENGVIRVGAEVGPDDILVGKVTPKGETELTPEERLLRAIFGEKAGDVRD
SSLKAPPGMKGVVLETRIFSKKDKADKKSKEKDQETIEEIRQNFQSQIDRIKDACREHLF
DLLAGKSAGKVMDNETHELLIREGQTYNEQNLRLIDVTKVSPLSTFVVDDDDLQDKVLSL
VLVARDNLDTLTRTMEKEIDKVTKGDELKPGVLKSVKVYIAKKRCLSIGDKMAGRHGNKG
VVSRIVPVEDMPFTEDGRPLQILLNPLGVPSRMNIGQVLEVHLGWAAKTLGFKVTTPVFD
GAKFEDICKELEKAYQKNPIVNYEMDPDNNKIIGKAKLYDGKTGEALLNPVTIGYMYYLK
LGHLVDDKIHARSIGSYALVTQQPLGGKSQFGGQRFGEMEVWAMEAYGAAYTLQELLTVK
SDDVQGRSKVYDAIVKGQNTPKPGIPESFNVMIREVHSLGLDIETTGDK
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggagcgaaagtcttattcctccaacaagttccacctggaactcccgtacctg
atcgaagtccagaaggcttcgtacgagcaattccttcaaaaggacattccgcaagaaaaa
aggatgaacgtcgggcttgaacgcgtgttccgcgatatcttcccgatcaccgatgacaag
gatctgtattccttgaagtatgaaggatattatttcggcatcccgaaatacagcatcccc
gaatgccgtgagcgcggtctcacgtattccatggaactttttgcaactctctccctccag
gtgttcgaaaaggacggagaagaaagcaagctcaaggaagaaatcaagaacgatgtcttg
gtttgcgaccttcctatcatgaccgagaacggaacgtttatcattaacggcgccgaacgc
gtcgtcgtttcgcagttgcaccgttctcctggtgtgagctttgacgaagaaatgcaacct
aacggccgctccgactacaagagccgtattattccgcaccgcggcgcatgggttgaattc
aacaccgaaggcgacatcctttacctcatcatcgaccgcaagaagaagatcgccgctacc
gccatgcttcgctgcatcggcttcgaaacgactcaggacatcctgaacctcttctacaag
aagactgacgaaatcgttctcgacgatgccgcattcaatgactttgacaaggaaggtgtc
tgcaccctcatcaaccgcatcatcttcaatgatgtcgttgacgaagaaacgggtgaaatc
atcctcgaagctaacactgtcatcgacgacaagaagctcgaacgcctccgcgaaagcagt
gtcgaaaagatcaccgtgctttccaaggaagaagacaacctcctcatccactacacgctc
gctgccgacaagacgaagtcccgcgaagacgccctcaaggctgtctactctgtgacccac
cagcagcaggaagaagctccgaacctccagaccgccgaacgctacttcgacgaactcttc
ctcaacgacccgcacaagtacgatcttggcgaagtcggtcgttaccgcttgaacgctaag
gtttacaccgctgctattcttgccaaggttaaggaagttgctgaacgcttcgaccgcgtc
aacgaattcaagatgccgtctgtgacccagatgacgatgagcaagactgacttcctcgct
atcatcgaatacatggtcggcctcttcaacggcgacgaaggctacactcttgacgatatc
gaccacttgggcaaccgtcgtacacgttccgtgggcgaactccttgccggtcagatttcc
gtcggcctctcccgtatgtctcgcgtcatccgcgaaaacctttctctccattccgaagaa
gaacagacgactccgcgcgaactcgtgaatactcgcatggtctccactgtcgtccaggca
ttctttggccagagccagttgtcccagttcatggaccagatgaacccgctttctgaactt
actcacaagcgtcgtctctccgctctcggtcctggtggtcttacccgtgaacgtgcaggc
ttcgaagtccgtgacgttcactacacgcactatggccgtctctgcccgattgaaactccg
gaaggtccgaacatcggtcttatcaactccctcgcatcttacgccgtggtgaaccacttc
ggcttcatcgaaaccccgtaccgtattgtgggtctcgttgaattcaaggacgctcagggc
aacaagtgctacttcccggaagaaaagtggcatttcggcatcttcaagggtttcgttcat
gatccgcacctcttcgtggaacttgaactcacccagaaggaaatcgacactgtccgcctg
aacctcgacaaccgccagcgcgaattgttcgaaggcttcgtgaacaaggtgttccagctc
aaggatgccgacggtaacgtttcttacagcaagaacggctttgctctcgatgatttcgac
ggcactccggactacgtgcaggtgggcgacgtcgtggaacagatcgtttccgactacatc
agctacctcactgcagacgaagaagactccttcaaggtcgctccggcttctaccgaactt
gacgaaaacaaccgcttcaagggcgacatggacggctacgtcatcgtccgcgacaagagc
gaatacccgcacttgatgaagcaggattccatcgccatcggcgacaccgaaactgaacgt
atcgacctcatggacgtggccccgatgcagattgtgtctgtggctgctggtcttatcccg
ttccttgaacacgatgacgctaaccgtgcattgatgggttctaacatgcagcgccaggct
gtgcctctgctccgcgccgaagctccggtcgtgggtactggtctcgaacgccgcgccgct
ctcgactcgggtacggttgtccgtgcaaagcacgacggtaaggtcacgtttgttgacgct
cgcaacatcactgtgcagcgcggcaagatggtgaacggcgtatttgaaccgctcactggc
cttggcgaaaactatgaattcctcggcaaggatccgattgacgaatacacgctccgcaag
tttgaacgttctaaccaggattcctgcatcaaccagaagccgatcgtgaacgttggcgac
ttcgtggaggtcggcgacgtcttggctgacggtgtttctactgaccacggcgaactcgct
ctcggtaagaacatcctcatcggcttcctcccgtggaacggttataactacgaagacgct
gtcattatctccgaagaacttgccatcaaggacacgttcacttctatccatatcgaagaa
tacgaaatggaagtccgcgacaccaagcgcggtccggaagaattgactcgtgaaattccg
aacgtcggtgaagacgctctccgcaacctcgacgaaaacggcgtgatccgcgtcggtgct
gaagtcggtccggacgatatcctcgtcggtaaggttaccccgaagggcgaaaccgaactc
actccggaagaacgtttgctccgtgccatcttcggcgaaaaggccggcgatgtgcgtgac
tcttccctcaaggctcctccgggaatgaagggcgtcgtgctcgaaacccgtatcttcagc
aagaaggacaaggccgacaagaagagcaaggaaaaggatcaggaaacgatcgaagaaatt
cgtcagaatttccagagccagatcgaccgcatcaaggatgcatgccgtgaacacttgttc
gacctcctcgcaggcaagtctgctggcaaggtgatggacaacgaaactcacgaacttttg
atccgcgaaggtcagacttataacgaacagaacctcagactcattgacgtgacgaaggtt
tctccgctctccacattcgttgtggatgacgatgaccttcaggacaaggtgctctctctc
gttctcgttgcccgcgacaacctcgatacccttacccgtacgatggaaaaggaaatcgac
aaggtcacgaagggtgacgaactcaagccgggcgttcttaagagcgtcaaggtgtacatc
gccaagaagcgttgcctctccatcggtgacaagatggcaggtcgccacggtaacaagggt
gtcgtctcgagaatcgttccggtcgaagacatgccgttcactgaagacggtcgtccgctc
cagattcttctgaacccgctgggcgtgccttctcgtatgaacatcggtcaggtgcttgaa
gttcacttgggctgggctgcaaagactctcggcttcaaggtgacgactcctgtgtttgac
ggtgccaagttcgaagatatctgcaaggaactcgaaaaggcttaccagaagaacccgatc
gtgaactacgaaatggatccggataacaacaagattatcggtaaggccaagctttacgac
ggtaagaccggtgaagccctcctgaacccggtgaccatcggttacatgtactacctcaag
ctcggtcacttggtcgatgacaagatccacgcacgttctatcggtagctacgctctcgtg
acgcagcagccgcttggcggtaagagccagttcggtggccagcgcttcggtgaaatggaa
gtgtgggctatggaagcttacggtgccgcttatacgttgcaggaactcctcaccgtcaag
tctgacgatgtgcagggccgttccaaggtctatgacgccattgtcaagggtcagaatact
ccgaagccgggtatccctgaatccttcaatgttatgattcgcgaagttcattctttgggt
cttgatatcgagaccactggagacaagtaa
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integrated database retrieval system
