Fibrobacter succinogenes: Fisuc_2481
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Entry
Fisuc_2481 CDS
T01099
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fsu
Fibrobacter succinogenes
Pathway
fsu00040
Pentose and glucuronate interconversions
fsu01100
Metabolic pathways
fsu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Fisuc_2481
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Fisuc_2481
Enzymes [BR:
fsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Fisuc_2481
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
CarboxypepD_reg
SdrD_B
NosD
DUF4198
phage_tail_N
Motif
Other DBs
NCBI-ProteinID:
ACX76067
UniProt:
A0ABN3Z046
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Position
3063443..3065137
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AA seq
564 aa
AA seq
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MKTSWMTVAQMRLLALLGVISFGLVACGDDGKVAGGTEAESTIALYVQMADGTPASTARV
RILPDDYLSSGPAENAWNETDEDGQVSFEVRNGRYTIEARNVNKSEASGAVHSVALAKSD
SKVDTIKLGELSSIEGFVLLGASPVVRVAGIDRYVVPDSTGHFVIDSLPQGSFDVQIGEP
EEVHSTVVQSNAGDTLFVDGSDTSSTIKVVKSKTSTATEYPESDWSVHDALLKQLQGYAT
GTLGASGRTDSTGKIEKAEGEICIVTTTDDLIDVVDSSKVDSLGNYGTKVALSQGSFREC
AEKDTPVWILFEKNGTYNLRSPLRIKSDKTVDGRGRDVRITGMGILTQESSNLIFENLTF
TAPAITARDTTSRRALSIHNRTHHVWVDHCTFEEYPLIEVDIKRSSYAVTLSWNRFENAQ
TGILFGLEPDIFVDTAQTLTMHHNYFANMEARGVLARHGKLHAYNNFFYDVKQAGIECTD
SASCYISNNAFNIETPVAVYRLENEDGTPDESTLGFVKMDGNMFGLGGEELAGDANGYEL
DYTVLVEISDAELAASIKNEAGPR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactagttggatgacggttgctcaaatgcgcttgttggctttgcttggcgtgatt
tcttttggccttgtggcttgtggcgatgatggcaaagtggctggtggcaccgaagccgaa
tcgactattgctttgtatgttcaaatggctgatggaacgcctgcgtctacggcgcgtgtt
cgcattttgccggacgattacctttctagcggccctgcggaaaatgcttggaacgaaaca
gatgaggatgggcaagtctcgtttgaagtccgtaacggccgctataccattgaagcacgt
aacgtgaataagtctgaggcttcgggtgctgtgcattcagtagctcttgccaaatcggat
tccaaagttgataccatcaagcttggcgagctttcgtctatcgaaggctttgtgctgctt
ggggcatcgcctgtcgttcgcgtggcgggcattgatcgctacgttgttcctgatagtacg
ggccattttgtgattgattcgcttccgcaggggagttttgatgtgcaaattggtgaacct
gaagaagtccattcaacagtggtgcaatccaatgcgggggacactttgtttgtggatggt
tccgacacttcatcgactattaaagtggtgaagtcaaaaacatcgacggcaacggaatat
cccgaaagcgactggagcgtacacgatgctttgctaaaacagctccaaggctatgccaca
gggacgctcggagcttctggccgtaccgatagcacggggaaaattgaaaaggccgaaggc
gaaatttgcattgttacgacaacggatgatttgattgacgtggtggattcttcaaaagtg
gattcgttgggaaattacggaactaaggtcgccttgtcccagggctctttccgtgaatgc
gccgagaaggatactccagtctggattctctttgaaaaaaatggaacgtacaatttgcgt
tcgccattgcgcataaagtctgataaaactgtggatggccgtggccgcgatgtgcgcatt
acgggcatgggcattttgactcaggaatcctcaaatctcattttcgagaatttgaccttt
accgcaccagcaattacggcacgggatacgacgagccgtcgtgctctctcgatccacaac
cgcacgcatcacgtttgggtggatcattgcacgttcgaagaatacccgctcatcgaggtg
gatatcaagcgcagttcgtatgcggtgacgctctcgtggaatcgttttgaaaatgcgcag
accggcattctgtttggtcttgaaccggatatctttgtggatactgctcagacgcttacg
atgcaccacaactactttgcgaacatggaagctcgcggtgtgcttgcacgtcatggcaaa
ttgcatgcgtacaacaatttcttttacgatgtaaaacaggccggaattgagtgcaccgat
tctgcgtcctgctacatctcaaacaatgcgttcaacatcgaaacgccggttgctgtgtac
cgccttgaaaacgaagacggtacgccggacgaatcaacgcttggctttgttaaaatggac
gggaatatgtttggccttggaggcgaggaactcgctggcgatgccaatggctatgaattg
gattatacagtgttagtggaaatctcggatgcagaacttgccgctagcatcaagaatgaa
gccggtcctcggtaa
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