Francisella tularensis subsp. holarctica OSU18: FTH_0256
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Entry
FTH_0256 CDS
T00399
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fth
Francisella tularensis subsp. holarctica OSU18
Pathway
fth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTH_0256 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fth03021
]
FTH_0256 (rpoA1)
03400 DNA repair and recombination proteins [BR:
fth03400
]
FTH_0256 (rpoA1)
Enzymes [BR:
fth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FTH_0256 (rpoA1)
Transcription machinery [BR:
fth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTH_0256 (rpoA1)
DNA repair and recombination proteins [BR:
fth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTH_0256 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
HHH_XRCC3_RpoA
RAD51D_N
POLH-Rev1_HhH
Motif
Other DBs
NCBI-ProteinID:
ABI82281
UniProt:
Q0BNQ3
LinkDB
All DBs
Position
246009..246980
Genome browser
AA seq
323 aa
AA seq
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MSNNNSKLEFVPNIQLKEDLGAFSYKVQLSPVEKGMAHILGNSIRRVLLSSLSGASIIKV
NIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDTGIDRLDLELSVNKSGVVSAGDFKTT
QGVEIINKDQPIATLTNQRAFSLTATVSVGRNVGILSAIPTELERVGDIAVDADFNPIKR
VAFEVFDNGDSETLEVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKTGDVLI
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataataattcaaaactggaatttgtacctaatatacagcttaaagaagactta
ggagcttttagctataaagtccaactttctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagggttttattatcttcactatcaggtgcatctataattaaagta
aacatcgctaatgtactacatgagtattctactttagaagatgtaaaagaagatgttgtt
gaaattgtttctaatttgaaaaaggttgcgataaagcttgatacaggtatagatagacta
gatttagaactatctgtaaataaatcaggtgtagttagcgctggagattttaagacgact
caaggtgtagaaataataaataaagatcagccaatagctactttgacaaaccaaagagca
tttagcttaactgctacagtgagtgtaggtagaaatgtcggaatactttctgcgatacca
accgagcttgagagagttggtgatatagctgtagatgctgattttaatcctattaaaaga
gttgcttttgaggtttttgataatggtgatagtgaaactttagaagtatttgtaaagaca
aatggtactatagaaccactagcagctgttacgaaagctttagagtatttctgtgagcaa
atatcagtatttgtatctctaagagtacctagtaatggtaaaacaggtgatgtattaata
gattctaatattgatcctatccttcttaagccgattgatgatttagagctaactgtcaga
tcatctaactgtctgcgtgcagaaaacattaagtatcttggtgatttggtacagtattct
gaatcacagcttatgaagatacctaacttaggtaagaaatctctcaatgagatcaaacaa
attttaatagataataacttgtctctaggtgtccaaattgacaattttagagagctagtt
gaaggaaaataa
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